RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Col16a1Q8BLX7 1580 aa11.33□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Tnks1bp1P58871 1720 aa11.32□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Zmym3Q9JLM4 1370 aa11.32□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Kat6bQ8BRB7 1872 aa11.32□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Cacna1sQ02789 1880 aa11.32□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Acsbg1Q99PU5 721 aa11.31□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Srcin1Q9QWI6 1250 aa11.31□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Shank2Q80Z38 1476 aa11.31□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Las1lA2BE28 776 aaKnown RBP11.31□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Znf316Q6PGE4 1016 aa11.31□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Ddx54Q8K4L0 874 aaKnown RBP11.31□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Mdc1Q5PSV9 1707 aa11.3□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Sbno1Q689Z5 1390 aa11.3□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Slc35g1Q8BY79 368 aa11.3□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Ltbp1Q8CG19 1712 aa11.3□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Gsto1O09131 240 aa11.29□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Dixdc1Q80Y83 711 aa11.29□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Zranb1Q7M760 708 aa11.29□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Fyb1O35601 819 aa11.28□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Cdhr2E9Q7P9 1308 aa11.28□□□□□ -0.6
Ssr3-201ENSMUST00000029414 Fer1l6E0CZ42 1862 aa11.28□□□□□ -0.6
Ssr3-201ENSMUST00000029414 InsrP15208 1372 aa11.27□□□□□ -0.6
Ssr3-201ENSMUST00000029414 InhbeO08717 350 aa11.27□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Idi2Q8BFZ6 227 aa11.27□□□□□ -0.61
Ssr3-201ENSMUST00000029414 FanciQ8K368 1330 aa11.27□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Mast2Q60592 1734 aa11.27□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Rock2P70336 1388 aa11.27□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Ly75Q60767 1723 aa11.26□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Gm38655A0A286YDK6 273 aa11.26□□□□□ -0.61
Ssr3-201ENSMUST00000029414 PaskQ8CEE6 1383 aa11.26□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Rundc1Q0VDN7 615 aa11.26□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Eno4Q8C042 619 aa11.26□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Ppargc1bQ8VHJ7 1014 aa11.26□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Map3k19E9Q3S4 1311 aa11.26□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Nid2O88322 1403 aa11.26□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Chd4Q6PDQ2 1915 aaKnown RBP11.26□□□□□ -0.61
Ssr3-201ENSMUST00000029414 TimelessQ9R1X4 1197 aa11.25□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Ncapd2Q8K2Z4 1392 aa11.25□□□□□ -0.61
Ssr3-201ENSMUST00000029414 CatipB9EKE5 520 aa11.25□□□□□ -0.61
Ssr3-201ENSMUST00000029414 ZgpatQ8VDM1 511 aa11.25□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Znf335A2A5K6 1337 aa11.25□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Scn7aB1AYL1 1681 aa11.25□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Card11Q8CIS0 1159 aa11.24□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Ubr1O70481 1757 aa11.24□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Frmpd2A0A140LI67 1392 aa11.24□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Zbtb4Q5F293 982 aa11.24□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Robo1O89026 1612 aa11.22□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Exosc9Q9JHI7 438 aaKnown RBP11.22□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Dzip1Q8BMD2 852 aa11.22□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Psrc1Q9D0P7 329 aa11.22□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Rgs17Q9QZB0 210 aa11.22□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Map2P20357 1828 aa11.22□□□□□ -0.61
Ssr3-201ENSMUST00000029414 MpndQ3TV65 487 aa11.22□□□□□ -0.61
Ssr3-201ENSMUST00000029414 Gimap6Q8K349 305 aa11.21□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Txnrd1Q9JMH6 613 aa11.21□□□□□ -0.62
Ssr3-201ENSMUST00000029414 TonslQ6NZL6 1363 aa11.21□□□□□ -0.62
Ssr3-201ENSMUST00000029414 HdgfP51859 237 aaKnown RBP11.2□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Rtl5Q5DTT4 599 aa11.19□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Akap11E9Q777 1895 aa11.19□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Ncoa4Q5U4H9 625 aa11.19□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Sgsm1Q8BPQ7 1093 aa11.18□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Nup153E9Q3G8 1462 aaKnown RBP11.18□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Pard3Q99NH2 1333 aa11.18□□□□□ -0.62
Ssr3-201ENSMUST00000029414 FocadA2AKG8 1798 aa11.17□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Nwd2Q6P5U7 1742 aa11.17□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Sf3b2Q3UJB0 878 aaKnown RBP11.17□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Adamtsl1Q8BLI0 1745 aa11.16□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Kif16bB1AVY7 1312 aa11.16□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Gm21698A0A087WQP8 267 aa11.15□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Gm21671G3UY31 267 aa11.15□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Slx1bQ8BX32 270 aa11.15□□□□□ -0.62
Ssr3-201ENSMUST00000029414 Cdk12Q14AX6 1484 aaKnown RBP11.14□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Astn2Q80Z10 1352 aa11.14□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Ccdc129Q14B48 1034 aa11.14□□□□□ -0.63
Ssr3-201ENSMUST00000029414 NefmP08553 848 aa11.14□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Cnga1P29974 684 aa11.13□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Csrnp3P59055 597 aa11.13□□□□□ -0.63
Ssr3-201ENSMUST00000029414 TnrQ8BYI9 1358 aa11.13□□□□□ -0.63
Ssr3-201ENSMUST00000029414 VirmaA2AIV2 1811 aaKnown RBP11.13□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Ccdc6D3YZP9 469 aa11.13□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Dennd6aQ8BH65 605 aa11.12□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Card10P58660 1021 aa11.12□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Kcnh5Q920E3 988 aa11.11□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Gm21190A0A0G2JGJ6 266 aa11.11□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Nlgn1Q99K10 843 aa11.11□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Zeb2Q9R0G7 1215 aa11.11□□□□□ -0.63
Ssr3-201ENSMUST00000029414 CemipQ8BI06 1361 aa11.1□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Pm20d1Q8C165 503 aa11.1□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Nckap5lQ6GQX2 1323 aa11.09□□□□□ -0.63
Ssr3-201ENSMUST00000029414 Amotl2Q8K371 772 aa11.09□□□□□ -0.63
Ssr3-201ENSMUST00000029414 FancaQ9JL70 1439 aa11.08□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Dnajc10Q9DC23 793 aa11.07□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Arfgef2A2A5R2 1792 aa11.07□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Scaf1Q5U4C3 1256 aaKnown RBP11.07□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Fmnl2A2APV2 1086 aa11.07□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Ildr2B5TVM2 661 aa11.07□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Kiaa0319Q5SZV5 1081 aa11.07□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Ano8Q6PB70 1060 aa11.07□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Sugp2Q8CH09 1067 aa11.07□□□□□ -0.64
Ssr3-201ENSMUST00000029414 Slit1Q80TR4 1531 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms