RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Prl7d1P04769 244 aa9.95□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Cep170Q6A065 1588 aa9.95□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Eif4g1Q6NZJ6 1600 aaKnown RBP9.95□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Camsap2Q8C1B1 1461 aa9.94□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Kdm5bQ80Y84 1544 aa9.94□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Dennd6aQ8BH65 605 aa9.94□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Synj2Q9D2G5 1434 aa9.94□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Me1P06801 572 aa9.94□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Dctn1O08788 1281 aa9.93□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Psma5Q9Z2U1 241 aaKnown RBP9.93□□□□□ -0.82
Ssr1-201ENSMUST00000021864 BC005561E9Q5E2 1589 aa9.93□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Kif4P33174 1231 aa9.93□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Zscan10Q3URR7 782 aa9.93□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Smg7Q5RJH6 1138 aaKnown RBP9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Cc2d1aQ8K1A6 943 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Gripap1Q8VD04 806 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Farp2Q91VS8 1065 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Nap1l1P28656 391 aaKnown RBP9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Smc3Q9CW03 1217 aaKnown RBP9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Cfap74Q3UY96 1578 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 OptnQ8K3K8 584 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 TkfcQ8VC30 578 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Naip2Q9QUK4 1447 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Gnai1B2RSH2 354 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 BcanQ61361 883 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Ncbp3Q8BZR9 615 aaKnown RBP9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Gnai3Q9DC51 354 aa9.92□□□□□ -0.82
Ssr1-201ENSMUST00000021864 NaspQ99MD9 773 aaKnown RBP9.91□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Rfx7F8VPJ6 1459 aa9.91□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Rbm5Q91YE7 815 aaKnown RBP9.91□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Kif16bB1AVY7 1312 aa9.91□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Commd10Q8JZY2 202 aa9.91□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Ubxn4Q8VCH8 506 aa9.91□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Cfap99A0A140LIX9 648 aa9.91□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Ncbp1Q3UYV9 790 aaKnown RBP9.9□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Kcnn1Q9EQR3 537 aa9.9□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Sall3Q62255 1320 aa9.9□□□□□ -0.82
Ssr1-201ENSMUST00000021864 PtprtQ99M80 1454 aa9.9□□□□□ -0.82
Ssr1-201ENSMUST00000021864 Ehmt1Q5DW34 1296 aa9.9□□□□□ -0.83
Ssr1-201ENSMUST00000021864 TefQ9JLC6 301 aa9.9□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Smg6P61406 1418 aaKnown RBP9.9□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Gm1043A0A140LJC2 1431 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Lrrc45Q8CIM1 670 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Rrbp1Q99PL5 1605 aaKnown RBP9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Sv2bQ8BG39 683 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Acsbg1Q99PU5 721 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Cep89Q9CZX2 791 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Znf518aB2RRF6 1478 aaKnown RBP9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Usp16Q99LG0 825 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Znf710Q3U288 666 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Egfem1Q8C088 590 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Kcnh5Q920E3 988 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Tmem94Q7TSH8 1360 aa9.89□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Nap1l2P51860 460 aa9.88□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Ric3Q8BPM6 367 aa9.88□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Emilin2Q8K482 1074 aa9.88□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Trim58Q5NCC9 485 aa9.88□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Ncapd3Q6ZQK0 1506 aa9.88□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Mre11Q61216 706 aa9.88□□□□□ -0.83
Ssr1-201ENSMUST00000021864 EzrP26040 586 aaKnown RBP9.88□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Luc7lQ9CYI4 371 aaKnown RBP9.88□□□□□ -0.83
Ssr1-201ENSMUST00000021864 DroshaQ5HZJ0 1373 aaKnown RBP9.88□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Pip4k2aO70172 405 aa9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 HypkQ9CR41 129 aa9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Triml2E9PW10 424 aa9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Hdgfl1Q2VPR5 283 aa9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Odf2lQ9D478 642 aa9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Anp32eP97822 260 aaKnown RBP9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Hnrnpul1Q8VDM6 859 aaKnown RBP9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Slx4Q6P1D7 1565 aa9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Gm21680A0A0G2JGR8 267 aa9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Cfdp1O88271 295 aaKnown RBP9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 4930572O03RikQ8C5Y0 211 aa9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Eif3aP23116 1344 aaKnown RBP9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 SafbD3YXK2 937 aaKnown RBP9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Rbm28Q8CGC6 750 aaKnown RBP9.87□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Ccdc173A0JLY1 547 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Dhx8A2A4P0 1244 aaKnown RBP9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Phactr2B1AVP0 632 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Erlin2Q8BFZ9 340 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 IkQ9Z1M8 557 aaKnown RBP9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Speer4bQ9D9F7 267 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Agtpbp1Q641K1 1218 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Ppm1eQ80TL0 749 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Atl3Q91YH5 541 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Swt1Q9DBQ9 907 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Gli2Q0VGT2 1544 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Kiaa0753Q6A000 959 aa9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Gtf2f1Q3THK3 508 aaKnown RBP9.86□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Polr3gQ6NXY9 223 aa9.85□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Ccdc171E9Q1U1 1324 aa9.85□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Ptch1Q61115 1434 aa9.85□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Hmox1P14901 289 aa9.85□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Mphosph10Q810V0 681 aaKnown RBP9.85□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Rapgef3Q8VCC8 918 aa9.85□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Ccdc96Q9CR92 584 aa9.85□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Zmym3Q9JLM4 1370 aa9.84□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Stim1P70302 685 aa9.84□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Map3k4O08648 1597 aa9.84□□□□□ -0.83
Ssr1-201ENSMUST00000021864 Erc1Q99MI1 1120 aa9.84□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms