RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 USP3Q9Y6I4 520 aa13.76□□□□□ -0.21
TUBB3-207ENST00000554927 A0A1W2PR77 199 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 SIN3BO75182 1162 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 GABREP78334 506 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 E2F1Q01094 437 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 CETN1Q12798 172 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 CST6Q15828 149 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 COBLL1Q53SF7 1204 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 HS1BP3Q53T59 392 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 PRICKLE2Q7Z3G6 844 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 MMAAQ8IVH4 418 aaKnown RBP13.75□□□□□ -0.21
TUBB3-207ENST00000554927 ZC3H3Q8IXZ2 948 aaKnown RBP13.75□□□□□ -0.21
TUBB3-207ENST00000554927 CACTIN-AS1Q8N1I8 211 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 RFFLQ8WZ73 363 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 METTL14Q9HCE5 456 aaKnown RBP13.75□□□□□ -0.21
TUBB3-207ENST00000554927 CISHQ9NSE2 258 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 ARMCX3Q9UH62 379 aaPredicted RBP13.75□□□□□ -0.21
TUBB3-207ENST00000554927 ATMQ13315 3056 aa13.75□□□□□ -0.21
TUBB3-207ENST00000554927 COL6A6A6NMZ7 2263 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 SDC3O75056 442 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 C7P10643 843 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 KRT10P13645 584 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 ACP1P24666 158 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 CD70P32970 193 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 CCR5P51681 352 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 ZNF445P59923 1031 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 MCCD1P59942 119 aaPredicted RBP13.74□□□□□ -0.21
TUBB3-207ENST00000554927 VAC14Q08AM6 782 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 KCNJ12Q14500 433 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 TRIP4Q15650 581 aaPredicted RBP13.74□□□□□ -0.21
TUBB3-207ENST00000554927 PPP1R26Q5T8A7 1209 aaPredicted RBP13.74□□□□□ -0.21
TUBB3-207ENST00000554927 SFMBT2Q5VUG0 894 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 ANKRD40Q6AI12 368 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 LSMEM2Q8N112 164 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.74□□□□□ -0.21
TUBB3-207ENST00000554927 OR14C36Q8NHC7 312 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 RNF139Q8WU17 664 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 MED8Q96G25 268 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 UBXN6Q9BZV1 441 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 ERVMER34-1Q9H9K5 563 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 HESX1Q9UBX0 185 aa13.74□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3DA0A087WVF3 549 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3IA0A087WXS9 549 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3EA0A087X179 549 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3KA0A087X1G2 549 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3FA6NER0 549 aaPredicted RBP13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3LB9A6J9 549 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 SIGLEC6O43699 453 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBL1XO60907 577 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 USP12O75317 370 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3HP0C7X1 549 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 SLC8A1P32418 973 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 RXRGP48443 463 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 PSMD8P48556 350 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 PROX2Q3B8N5 592 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 ADGRF1Q5T601 910 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3GQ6DHY5 549 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3CQ6IPX1 549 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 ELOA2Q8IYF1 753 aaPredicted RBP13.73□□□□□ -0.21
TUBB3-207ENST00000554927 TBC1D3Q8IZP1 549 aaPredicted RBP13.73□□□□□ -0.21
TUBB3-207ENST00000554927 SEMA4DQ92854 862 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 DHTKD1Q96HY7 919 aaPredicted RBP13.73□□□□□ -0.21
TUBB3-207ENST00000554927 HIC2Q96JB3 615 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.73□□□□□ -0.21
TUBB3-207ENST00000554927 OLA1Q9NTK5 396 aaKnown RBP13.73□□□□□ -0.21
TUBB3-207ENST00000554927 STIM2Q9P246 746 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 FZD4Q9ULV1 537 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 HEMK1Q9Y5R4 338 aaPredicted RBP13.73□□□□□ -0.21
TUBB3-207ENST00000554927 PLXNA2O75051 1894 aa13.73□□□□□ -0.21
TUBB3-207ENST00000554927 MYLKQ15746 1914 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 BICDL2A1A5D9 508 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 MAGEC1O60732 1142 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 ZBED1O96006 694 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-207ENST00000554927 SGSHP51688 502 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 TKTL1P51854 596 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 HNRNPA1L2Q32P51 320 aaKnown RBP13.72□□□□□ -0.21
TUBB3-207ENST00000554927 CCDC40Q4G0X9 1142 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 NAPEPLDQ6IQ20 393 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 SND1Q7KZF4 910 aaKnown RBP eCLIP13.72□□□□□ -0.21
TUBB3-207ENST00000554927 TMC6Q7Z403 805 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 KIAA0907Q7Z7F0 614 aaPredicted RBP13.72□□□□□ -0.21
TUBB3-207ENST00000554927 PIGZQ86VD9 579 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
TUBB3-207ENST00000554927 MFN1Q8IWA4 741 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 ANKRD52Q8NB46 1076 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 SPATA20Q8TB22 786 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 WFDC5Q8TCV5 224 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 NDRG1Q92597 394 aaKnown RBP13.72□□□□□ -0.21
TUBB3-207ENST00000554927 TTC9Q92623 222 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 TATDN2Q93075 761 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 CEP63Q96MT8 703 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 DEPDC7Q96QD5 511 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 SFMBT1Q9UHJ3 866 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 KIAA1257Q9ULG3 409 aa13.72□□□□□ -0.21
TUBB3-207ENST00000554927 HBS1LQ9Y450 684 aaKnown RBP13.72□□□□□ -0.21
TUBB3-207ENST00000554927 TRIM38O00635 465 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 CD19P15391 556 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 GOT1P17174 413 aa13.71□□□□□ -0.21
TUBB3-207ENST00000554927 MAT2AP31153 395 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms