RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 ERVW-1Q9UQF0 538 aa12.66□□□□□ -0.38
MTHFD1-207ENST00000554677 DOCK4Q8N1I0 1966 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 H0Y8X5 98 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 BIN1O00499 593 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 MID1O15344 667 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 FLRT2O43155 660 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 GADD45BO75293 160 aaPredicted RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 LUC7L3O95232 432 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 ASLP04424 464 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 WNT1P04628 370 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 CTSKP43235 329 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 ACADSBP45954 432 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 NUCB2P80303 420 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 CETN1Q12798 172 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 KCNJ12Q14500 433 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 TAF5Q15542 800 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 ZC3H12AQ5D1E8 599 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 KIAA0895LQ68EN5 471 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 TMPRSS7Q7RTY8 843 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 MARCH9Q86YJ5 346 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 DHX40Q8IX18 779 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 WDTC1Q8N5D0 677 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 ZNF557Q8N988 423 aaPredicted RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 PTPRN2Q92932 1015 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 IGSF8Q969P0 613 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 FAM149B1Q96BN6 582 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 PRMT1Q99873 361 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 DDX50Q9BQ39 737 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 SRRTQ9BXP5 876 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 INTS2Q9H0H0 1204 aaKnown RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 UBE2TQ9NPD8 197 aaPredicted RBP12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 ST7Q9NRC1 585 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 FBXL12Q9NXK8 326 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 ADAMTS1Q9UHI8 967 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 SCML1Q9UN30 329 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 CTNND2Q9UQB3 1225 aa12.65□□□□□ -0.38
MTHFD1-207ENST00000554677 ITIH6Q6UXX5 1313 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 A0A1W2PP55 124 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 A0A1W2PPC4 97 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 BICDL2A1A5D9 508 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 TARSL2A2RTX5 802 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 BECN2A8MW95 431 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 KCNU1A8MYU2 1149 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 E5RJQ4 531 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 WNT9AO14904 365 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 PCDHGA12O60330 932 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 LETM1O95202 739 aaPredicted RBP12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 MOCS2O96007 188 aaPredicted RBP12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 SRPRAP08240 638 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 TACR2P21452 398 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 TEAD4Q15561 434 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 CST6Q15828 149 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 MEA1Q16626 185 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 TTC31Q49AM3 519 aaPredicted RBP12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 RAP1GAP2Q684P5 730 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 GJB7Q6PEY0 223 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 NCEH1Q6PIU2 408 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 MMAAQ8IVH4 418 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 LGI2Q8N0V4 545 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 AADATQ8N5Z0 425 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 RPL10LQ96L21 214 aaKnown RBP12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 MED15Q96RN5 788 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 CDC6Q99741 560 aa12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.64□□□□□ -0.39
MTHFD1-207ENST00000554677 IGSF10Q6WRI0 2623 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 COL5A1P20908 1838 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 TRPM6Q9BX84 2022 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 A0A1W2PR77 199 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 VILLO15195 856 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 SART1O43290 800 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 GNA14O95837 355 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 TRUB2O95900 331 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 KRT5P13647 590 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 SLC9A1P19634 815 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 SLC8A1P32418 973 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 STK19P49842 368 aaPredicted RBP12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 ST8SIA6P61647 398 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 YWHAZP63104 245 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 RACK1P63244 317 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 ECT2LQ008S8 904 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 APBA1Q02410 837 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 CAMK2BQ13554 666 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 SUZ12Q15022 739 aaKnown RBP12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 SHBQ15464 509 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 PRAMEF14Q5SWL7 426 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 STK40Q8N2I9 435 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 ALG14Q96F25 216 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 BTN2A3PQ96KV6 586 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 SLC6A18Q96N87 628 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 THAP9Q9H5L6 903 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 POPDC2Q9HBU9 364 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 LHX6Q9UPM6 363 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 NCKAP1Q9Y2A7 1128 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 GPSM3Q9Y4H4 160 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 SHROOM3Q8TF72 1996 aa12.63□□□□□ -0.39
MTHFD1-207ENST00000554677 SMG1Q96Q15 3661 aaKnown RBP12.62□□□□□ -0.39
MTHFD1-207ENST00000554677 A0A1B0GTQ1 180 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms