RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 Q6ZUG5 572 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 OTUD6AQ7L8S5 288 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 KANSL1Q7Z3B3 1105 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 CACNA2D4Q7Z3S7 1137 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 FAM124AQ86V42 546 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 WDR5BQ86VZ2 330 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 RNF149Q8NC42 400 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 ING5Q8WYH8 240 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 RABGGTAQ92696 567 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 TMEM143Q96AN5 459 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 E2F7Q96AV8 911 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 MSANTD3Q96H12 275 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 AJUBAQ96IF1 538 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 CEP170P1Q96L14 293 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 APOL6Q9BWW8 343 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 LRRC2Q9BYS8 371 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 CDH19Q9H159 772 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 DHX33Q9H6R0 707 aaKnown RBP5.33□□□□□ -1.56
ATXN3-228ENST00000554592 C8orf33Q9H7E9 229 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-228ENST00000554592 RXFP3Q9NSD7 469 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 MKS1Q9NXB0 559 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 GALNT8Q9NY28 637 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 FTSJ1Q9UET6 329 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 KCNG1Q9UIX4 513 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 TMPRSS11EQ9UL52 423 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 HES2Q9Y543 173 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 PCDHGA5Q9Y5G8 931 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 PIAS3Q9Y6X2 628 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 CFAP47Q6ZTR5 3102 aa5.33□□□□□ -1.56
ATXN3-228ENST00000554592 MAP1BP46821 2468 aaKnown RBP5.33□□□□□ -1.56
ATXN3-228ENST00000554592 BAHCC1Q9P281 2608 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 CYP3A7-CYP3A51PA0A087WV96 503 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 A0A1B0GUA9 196 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 E2F8A0AVK6 867 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 ARHGEF37A1IGU5 675 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 SRRM3A6NNA2 597 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 INO80B-WBP1J3KQ70 363 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 K7ESM1 405 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 ADAMTS3O15072 1205 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 PRPF3O43395 683 aaKnown RBP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 EPN2O95208 641 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 GSPT1P15170 499 aaKnown RBP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 FCARP24071 287 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 CCND1P24385 295 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 CYP3A7P24462 503 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 AKAP5P24588 427 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 CCNE1P24864 410 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 ELF1P32519 619 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 QARSP47897 775 aaKnown RBP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 NOVA1P51513 510 aaKnown RBP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 RCAN1P53805 252 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 NPEPPSP55786 919 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 SRSF2Q01130 221 aaKnown RBP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 ROM1Q03395 351 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 ADCY2Q08462 1091 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 TFDP1Q14186 410 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 MXD4Q14582 209 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 NOLC1Q14978 699 aaKnown RBP eCLIP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 NECTIN1Q15223 517 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 SLC5A9Q2M3M2 681 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 CYP4A22Q5TCH4 519 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 DAB2IPQ5VWQ8 1189 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 ERICH6BQ5W0A0 696 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 PLA2G4FQ68DD2 849 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 MFSD6LQ8IWD5 586 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 KBTBD2Q8IY47 623 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 ZNF461Q8TAF7 563 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 CSGALNACT1Q8TDX6 532 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 DEPDC1BQ8WUY9 529 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 SMARCD2Q92925 531 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 GJA10Q969M2 543 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 CPB2Q96IY4 423 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 TACO1Q9BSH4 297 aaKnown RBP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 C22orf23Q9BZE7 217 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 GPR88Q9GZN0 384 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 VPS45Q9NRW7 570 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 DNAJC28Q9NX36 388 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 PPP4R1LQ9P1A2 415 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 MTRRQ9UBK8 725 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 IP6K2Q9UHH9 426 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 EDARQ9UNE0 448 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 LUC7L2Q9Y383 392 aaKnown RBP5.32□□□□□ -1.56
ATXN3-228ENST00000554592 CHD6Q8TD26 2715 aa5.32□□□□□ -1.56
ATXN3-228ENST00000554592 ZMYM2Q9UBW7 1377 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 DOCK5Q9H7D0 1870 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 WDR27A2RRH5 827 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 KLHL33A6NCF5 533 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 CASTOR2A6NHX0 329 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 PRRG1O14668 218 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 TRAPPC3O43617 180 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 RPP40O75818 363 aaKnown RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 AKAP3O75969 853 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 SNUPNO95149 360 aaKnown RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 LPLP06858 475 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 THP07101 528 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 CEACAM1P13688 526 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 CEBPBP17676 345 aa5.31□□□□□ -1.56
ATXN3-228ENST00000554592 ARF4P18085 180 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-228ENST00000554592 YWHABP31946 246 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms