RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 RSC1A1Q92681 617 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 SLF1Q9BQI6 1058 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 SPZ1Q9BXG8 430 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 SLC26A6Q9BXS9 759 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 TTYH3Q9C0H2 523 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 RANBP17Q9H2T7 1088 aaKnown RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 PABPC3Q9H361 631 aaKnown RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 SH2D4AQ9H788 454 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 MLXIPQ9HAP2 919 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 SLC38A10Q9HBR0 1119 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 PRDM8Q9NQV8 689 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 TMOD4Q9NZQ9 345 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 HECAQ9UBI9 543 aaPredicted RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 FEM1BQ9UK73 627 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 SLC13A4Q9UKG4 626 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 SMG5Q9UPR3 1016 aaKnown RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 DDX49Q9Y6V7 483 aaKnown RBP6.32□□□□□ -1.4
PRDM4-206ENST00000550659 BRCA2P51587 3418 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 PLXNB2O15031 1838 aa6.32□□□□□ -1.4
PRDM4-206ENST00000550659 OR2W5A6NFC9 320 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 FCHO1O14526 889 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 PCDH17O14917 1159 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 VPS4BO75351 444 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 ACTL6BO94805 426 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 IPO13O94829 963 aaKnown RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 PRSS23O95084 383 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 KRT1P04264 644 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 POLBP06746 335 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 INHBBP09529 407 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 CALM1P0DP23 149 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 CALM2P0DP24 149 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 CALM3P0DP25 149 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 GJB2P29033 226 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 PAPOLAP51003 745 aaKnown RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 STAT2P52630 851 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 LOXL3P58215 753 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 AP2B1P63010 937 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 MPP1Q00013 466 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 GUCY1B3Q02153 619 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 IKQ13123 557 aaPredicted RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 COG2Q14746 738 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 GPATCH4Q5T3I0 446 aaKnown RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 SYNE3Q6ZMZ3 975 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 FASTKD5Q7L8L6 764 aaKnown RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 HERC6Q8IVU3 1022 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 SLC44A2Q8IWA5 706 aaPredicted RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 CCDC117Q8IWD4 279 aaPredicted RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 ANKRD13CQ8N6S4 541 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 PSD4Q8NDX1 1056 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 OR1N1Q8NGS0 311 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 HERVK_113Q902F9 699 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 ST8SIA2Q92186 375 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 SDCCAG3Q96C92 435 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 FAM84AQ96KN4 292 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 TRIB1Q96RU8 372 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 RTKNQ9BST9 563 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 SLC46A2Q9BY10 475 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 ARHGAP39Q9C0H5 1083 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 PORCNQ9H237 461 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 CD320Q9NPF0 282 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 RIC8AQ9NPQ8 531 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 RASSF1Q9NS23 344 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 RNF186Q9NXI6 227 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 VPS54Q9P1Q0 977 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 IFT80Q9P2H3 777 aaPredicted RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 ORC3Q9UBD5 711 aaPredicted RBP6.31□□□□□ -1.4
PRDM4-206ENST00000550659 KCNJ14Q9UNX9 436 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 CDYLQ9Y232 598 aa6.31□□□□□ -1.4
PRDM4-206ENST00000550659 ASTN1O14525 1302 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 HMX3A6NHT5 357 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 KIF28PB7ZC32 967 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 B9A039 149 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 ZBTB5O15062 677 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 HOXC11O43248 304 aaPredicted RBP6.3□□□□□ -1.4
PRDM4-206ENST00000550659 EDIL3O43854 480 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 DHX16O60231 1041 aaKnown RBP6.3□□□□□ -1.4
PRDM4-206ENST00000550659 MFAP3LO75121 409 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 PIAS2O75928 621 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 CNTFP26441 200 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 KIF5BP33176 963 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 RXRGP48443 463 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 CHN2P52757 468 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 ALDH18A1P54886 795 aaKnown RBP6.3□□□□□ -1.4
PRDM4-206ENST00000550659 IRX3P78415 501 aaPredicted RBP6.3□□□□□ -1.4
PRDM4-206ENST00000550659 KRT17Q04695 432 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 TLE2Q04725 743 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 ZNF844Q08AG5 666 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 KCNAB1Q14722 419 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 PFKFB3Q16875 520 aaPredicted RBP6.3□□□□□ -1.4
PRDM4-206ENST00000550659 USH1GQ495M9 461 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 EARS2Q5JPH6 523 aaKnown RBP6.3□□□□□ -1.4
PRDM4-206ENST00000550659 CACHD1Q5VU97 1274 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 TAPT1Q6NXT6 567 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 C17orf99Q6UX52 265 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 KCTD20Q7Z5Y7 419 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 FAM160B2Q86V87 743 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 ZNF280BQ86YH2 543 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 TMEM151BQ8IW70 566 aa6.3□□□□□ -1.4
PRDM4-206ENST00000550659 HSCBQ8IWL3 235 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms