RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 UBXN6Q9BZV1 441 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 DNAI2Q9GZS0 605 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 FBXO44Q9H4M3 255 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 CCSER2Q9H7U1 834 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 ECT2Q9H8V3 914 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 NMUR1Q9HB89 426 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 DUS2Q9NX74 493 aaKnown RBP8.87□□□□□ -0.99
SSBP3-212ENST00000528930 SMPD4Q9NXE4 827 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 TSPAN16Q9UKR8 245 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 MMP17Q9ULZ9 603 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 SCML2Q9UQR0 700 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 PCDHGB2Q9Y5G2 931 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.87□□□□□ -0.99
SSBP3-212ENST00000528930 ABCA2Q9BZC7 2435 aa8.87□□□□□ -0.99
SSBP3-212ENST00000528930 TULP2O00295 520 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 CYP26A1O43174 497 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 TNFSF14O43557 240 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 GREM1O60565 184 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 TBX18O95935 607 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 ITGB2P05107 769 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 VDRP11473 427 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 ERCC5P28715 1186 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-212ENST00000528930 HNF1BP35680 557 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 YWHAEP62258 255 aaKnown RBP8.86□□□□□ -0.99
SSBP3-212ENST00000528930 GCNT1Q02742 428 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 ZNF33AQ06730 810 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 PDE4CQ08493 712 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 CETN1Q12798 172 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 GAB4Q2WGN9 574 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 PLEKHG6Q3KR16 790 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 SGO2Q562F6 1265 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 TMEM270Q6UE05 265 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 CCDC186Q7Z3E2 898 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 SCD5Q86SK9 330 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 PIGZQ86VD9 579 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 ADGRG2Q8IZP9 1017 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 PPM1KQ8N3J5 372 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 ZNF276Q8N554 614 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 TTC16Q8NEE8 873 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 USP33Q8TEY7 942 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 TFAP2BQ92481 460 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 POM121Q96HA1 1249 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 HIC2Q96JB3 615 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 P2RY13Q9BPV8 354 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 INTS2Q9H0H0 1204 aaKnown RBP8.86□□□□□ -0.99
SSBP3-212ENST00000528930 LRRC4CQ9HCJ2 640 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 CYLDQ9NQC7 956 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 TLR8Q9NR97 1041 aaKnown RBP8.86□□□□□ -0.99
SSBP3-212ENST00000528930 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
SSBP3-212ENST00000528930 CFAP97Q9P2B7 532 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 KIAA1257Q9ULG3 409 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 CNTN6Q9UQ52 1028 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 BTBD3Q9Y2F9 522 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 PCDHB4Q9Y5E5 795 aa8.86□□□□□ -0.99
SSBP3-212ENST00000528930 SPENQ96T58 3664 aaKnown RBP8.86□□□□□ -0.99
SSBP3-212ENST00000528930 LRRK1Q38SD2 2015 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 A0A1W2PQH9 124 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 O00370 1275 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 SCAMP3O14828 347 aaKnown RBP8.85□□□□□ -0.99
SSBP3-212ENST00000528930 TLR5O60602 858 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 LILRA1O75019 489 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 CALCAP01258 141 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 PAEPP09466 180 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 RARGP13631 454 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 CD19P15391 556 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 ITGB6P18564 788 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 SLC9A1P19634 815 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 IFNAR2P48551 515 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 ZNF132P52740 706 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 AMPD2Q01433 879 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 APBA1Q02410 837 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 BYSLQ13895 437 aaKnown RBP8.85□□□□□ -0.99
SSBP3-212ENST00000528930 GOLGA7BQ2TAP0 167 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 CT47A1Q5JQC4 288 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-212ENST00000528930 KIAA1614Q5VZ46 1190 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 PM20D1Q6GTS8 502 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 TRIM65Q6PJ69 517 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 LYSMD3Q7Z3D4 306 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 CREBRFQ8IUR6 639 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 SLC41A1Q8IVJ1 513 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 CPA6Q8N4T0 437 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 UBA3Q8TBC4 463 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 RHBDD1Q8TEB9 315 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 ATP2A3Q93084 1043 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 CRACR2AQ9BSW2 395 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 THAP9Q9H5L6 903 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 IL21RQ9HBE5 538 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 TM7SF3Q9NS93 570 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 NUDT5Q9UKK9 219 aa8.85□□□□□ -0.99
SSBP3-212ENST00000528930 SPG11Q96JI7 2443 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 E2F8A0AVK6 867 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 GTPBP10A4D1E9 387 aaKnown RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 GOLGA6L3A6NEY3 463 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 MSTNO14793 375 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 XPO1O14980 1071 aaKnown RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 ALDH1A2O94788 518 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 NFATC1O95644 943 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 CYP17A1P05093 508 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 ATP5C1P36542 298 aaKnown RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 OPRD1P41143 372 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms