RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 TSPAN18Q96SJ8 248 aa7.3□□□□□ -1.24
NUDCD1-204ENST00000521439 TRIM2Q9C040 744 aa7.3□□□□□ -1.24
NUDCD1-204ENST00000521439 MAF1Q9H063 256 aa7.3□□□□□ -1.24
NUDCD1-204ENST00000521439 CLPBQ9H078 707 aa7.3□□□□□ -1.24
NUDCD1-204ENST00000521439 ARL8BQ9NVJ2 186 aa7.3□□□□□ -1.24
NUDCD1-204ENST00000521439 MTMR4Q9NYA4 1195 aa7.3□□□□□ -1.24
NUDCD1-204ENST00000521439 EEA1Q15075 1411 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 PROP1O75360 226 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 C1QL1O75973 258 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 IGLV2-14P01704 120 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 RFPL3SP0C7P2 107 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 NHLRC4P0CG21 123 aaPredicted RBP7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 TNNT1P13805 278 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 SSR1P43307 286 aaKnown RBP7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 SHC2P98077 582 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 THOC5Q13769 683 aaKnown RBP7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 PROSER3Q2NL68 480 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 PRAMEF17Q5VTA0 474 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 ATG16L1Q676U5 607 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 ENDOVQ8N8Q3 282 aaKnown RBP7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 PNLDC1Q8NA58 520 aaKnown RBP7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 P2RY11Q96G91 374 aa7.29□□□□□ -1.24
NUDCD1-204ENST00000521439 TMEM232C9JQI7 657 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 KLK10O43240 276 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 CNTN5O94779 1100 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 ALDOCP09972 364 aaKnown RBP7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 BMP5P22003 454 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 IDUAP35475 653 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 MAPK7Q13164 816 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 FCRLBQ6BAA4 426 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 ANO7Q6IWH7 933 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 DENND1BQ6P3S1 775 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 FAM98AQ8NCA5 519 aaKnown RBP7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 HTRA1Q92743 480 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 HVCN1Q96D96 273 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 ZNF764Q96H86 408 aaPredicted RBP7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 ASB2Q96Q27 587 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 SEC62Q99442 399 aaKnown RBP7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 ABHD14AQ9BUJ0 271 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 GATA5Q9BWX5 397 aaPredicted RBP7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 GPR63Q9BZJ6 419 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 SLC22A11Q9NSA0 550 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 TMEM51Q9NW97 253 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 ZNHIT2Q9UHR6 403 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 TNIKQ9UKE5 1360 aa7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 EIF4G1Q04637 1599 aaKnown RBP7.28□□□□□ -1.24
NUDCD1-204ENST00000521439 AOX1Q06278 1338 aa7.27□□□□□ -1.24
NUDCD1-204ENST00000521439 CCDC196A0A1B0GTZ2 297 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 CYP2A6P11509 494 aaPredicted RBP7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 TGM2P21980 687 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 TUBP50607 506 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 ALKBH1Q13686 389 aaKnown RBP7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 WDR45BQ5MNZ6 344 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 TFAP2DQ7Z6R9 452 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 RFX6Q8HWS3 928 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 STAMQ92783 540 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 KCNJ9Q92806 393 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 ATP2A3Q93084 1043 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 MPP4Q96JB8 637 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 OSBPL5Q9H0X9 879 aaPredicted RBP7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 UBN1Q9NPG3 1134 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 GDAQ9Y2T3 454 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 AFG3L2Q9Y4W6 797 aa7.27□□□□□ -1.25
NUDCD1-204ENST00000521439 NPIPB13A6NJU9 1138 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 LRRC3CA6NJW4 275 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 NPIPB5A8MRT5 1133 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 NPIPB4C9JG80 1138 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 RRHO14718 337 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 PRPH2P23942 346 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 DDIT3P35638 169 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 ELLP55199 621 aaPredicted RBP7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 TUBA4AP68366 448 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 B4GALNT1Q00973 533 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 FOXD4Q12950 439 aaPredicted RBP7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 G3BP1Q13283 466 aaKnown RBP eCLIP7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 SLC4A8Q2Y0W8 1093 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 ANXA2RQ3ZCQ2 193 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 RUNDC3AQ59EK9 446 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 STRIP1Q5VSL9 837 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 HEATR4Q86WZ0 1026 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 NBPF5PQ86XG9 351 aaPredicted RBP7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 DNAJC10Q8IXB1 793 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 EXD3Q8N9H8 876 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 HDHD5Q9BXW7 423 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 PRDM13Q9H4Q3 707 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 THAP1Q9NVV9 213 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 TMEM98Q9Y2Y6 226 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 EMSYQ7Z589 1322 aa7.26□□□□□ -1.25
NUDCD1-204ENST00000521439 A6NLC8 198 aa7.25□□□□□ -1.25
NUDCD1-204ENST00000521439 PRRT4C9JH25 899 aa7.25□□□□□ -1.25
NUDCD1-204ENST00000521439 J3KRW8 73 aa7.25□□□□□ -1.25
NUDCD1-204ENST00000521439 OVOL3O00110 214 aa7.25□□□□□ -1.25
NUDCD1-204ENST00000521439 DSCR3O14972 297 aa7.25□□□□□ -1.25
NUDCD1-204ENST00000521439 DHX16O60231 1041 aaKnown RBP7.25□□□□□ -1.25
NUDCD1-204ENST00000521439 PPFIA2O75334 1257 aa7.25□□□□□ -1.25
NUDCD1-204ENST00000521439 SGPL1O95470 568 aa7.25□□□□□ -1.25
NUDCD1-204ENST00000521439 LYL1P12980 280 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms