RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 LAMC2Q13753 1193 aa15.33■□□□□ 0.05
SNF8-203ENST00000504000 PPM1JQ5JR12 505 aa15.33■□□□□ 0.05
SNF8-203ENST00000504000 SETD3Q86TU7 594 aaPredicted RBP15.33■□□□□ 0.05
SNF8-203ENST00000504000 ZNF410Q86VK4 478 aa15.33■□□□□ 0.05
SNF8-203ENST00000504000 MARVELD2Q8N4S9 558 aa15.33■□□□□ 0.05
SNF8-203ENST00000504000 PDGFDQ9GZP0 370 aaPredicted RBP15.33■□□□□ 0.05
SNF8-203ENST00000504000 PSMD13Q9UNM6 376 aa15.33■□□□□ 0.05
SNF8-203ENST00000504000 AKT3Q9Y243 479 aa15.33■□□□□ 0.05
SNF8-203ENST00000504000 CITO14578 2027 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 EVPLQ92817 2033 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 DCXO43602 365 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 TIMM44O43615 452 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 MFSD11O43934 449 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 PEX10O60683 326 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 TRIM13O60858 407 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 CYP2C9P11712 490 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 RAG1P15918 1043 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 NCF2P19878 526 aaPredicted RBP15.33■□□□□ 0.04
SNF8-203ENST00000504000 CHN2P52757 468 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 ATXN1P54253 815 aaKnown RBP15.33■□□□□ 0.04
SNF8-203ENST00000504000 AIF1P55008 147 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 CSE1LP55060 971 aaKnown RBP15.33■□□□□ 0.04
SNF8-203ENST00000504000 CRADDP78560 199 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 VGLL4Q14135 290 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 MMEL1Q495T6 779 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 CFAP157Q5JU67 520 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 ZFP1Q6P2D0 407 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 C16orf89Q6UX73 402 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 HPS6Q86YV9 775 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 DCLK2Q8N568 766 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 ICA1LQ8NDH6 482 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 PGBD4Q96DM1 585 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 GORASP1Q9BQQ3 440 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 BRD8Q9H0E9 1235 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 SLC17A6Q9P2U8 582 aa15.33■□□□□ 0.04
SNF8-203ENST00000504000 RALGAPA2Q2PPJ7 1873 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 A0A0G2JLL6 359 aaPredicted RBP15.32■□□□□ 0.04
SNF8-203ENST00000504000 RGSL1A5PLK6 1076 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 NCAM2O15394 837 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 HSPA4LO95757 839 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 PSMB4P28070 264 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 PEX2P28328 305 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 CSRP3P50461 194 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 AQP4P55087 323 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 EN1Q05925 392 aaPredicted RBP15.32■□□□□ 0.04
SNF8-203ENST00000504000 IFRD2Q12894 506 aaPredicted RBP15.32■□□□□ 0.04
SNF8-203ENST00000504000 KCTD2Q14681 263 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 UGT2A3Q6UWM9 527 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 PDZD4Q76G19 769 aaPredicted RBP15.32■□□□□ 0.04
SNF8-203ENST00000504000 PRRT2Q7Z6L0 340 aaPredicted RBP15.32■□□□□ 0.04
SNF8-203ENST00000504000 RSPH3Q86UC2 560 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 FBXO16Q8IX29 292 aaPredicted RBP15.32■□□□□ 0.04
SNF8-203ENST00000504000 ZNF567Q8N184 647 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 PHTF2Q8N3S3 785 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 CPSF7Q8N684 471 aaKnown RBP15.32■□□□□ 0.04
SNF8-203ENST00000504000 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNF8-203ENST00000504000 CATSPER1Q8NEC5 780 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 BEST2Q8NFU1 509 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 RP9Q8TA86 221 aaKnown RBP15.32■□□□□ 0.04
SNF8-203ENST00000504000 SHKBP1Q8TBC3 707 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 RNF139Q8WU17 664 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 TSPAN18Q96SJ8 248 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 SLC9A7Q96T83 725 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 MCMBPQ9BTE3 642 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 BFARQ9NZS9 450 aa15.32■□□□□ 0.04
SNF8-203ENST00000504000 PPP1R1BQ9UD71 204 aaPredicted RBP15.32■□□□□ 0.04
SNF8-203ENST00000504000 SLCO1B7G3V0H7 640 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 AP3B1O00203 1094 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 ZBTB14O43829 449 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 DAB1O75553 588 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 PDE5AO76074 875 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 AP2A1O95782 977 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 CAPNS1P04632 268 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 LGALS2P05162 132 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 PGK2P07205 417 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 ERVK-10P10266 1014 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 DNAJB2P25686 324 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 SERPINB6P35237 376 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 ARHGAP1Q07960 439 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 LSAMPQ13449 338 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 HERC3Q15034 1050 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 PDK3Q15120 406 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 TRIP10Q15642 601 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 PDCD2Q16342 344 aaPredicted RBP15.31■□□□□ 0.04
SNF8-203ENST00000504000 VWA5B1Q5TIE3 1220 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 LPCAT4Q643R3 524 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 FSTL4Q6MZW2 842 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 PQLC1Q8N2U9 271 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 ZNF781Q8N8C0 355 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 OR6B3Q8NGW1 331 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 CLEC4CQ8WTT0 213 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 COPS5Q92905 334 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 SNX27Q96L92 541 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 FCRL3Q96P31 734 aaPredicted RBP15.31■□□□□ 0.04
SNF8-203ENST00000504000 MAGEB5Q9BZ81 275 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 ILKAPQ9H0C8 392 aaPredicted RBP15.31■□□□□ 0.04
SNF8-203ENST00000504000 Q9H521 79 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 TCF7L2Q9NQB0 619 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 OXSMQ9NWU1 459 aa15.31■□□□□ 0.04
SNF8-203ENST00000504000 PLK2Q9NYY3 685 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms