RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 TRAF3IP3Q9Y228 551 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PIN4Q9Y237 131 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 MKI67P46013 3256 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PTPRSQ13332 1948 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 RBAK-RBAKDNI3L0D1 243 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 PDXKO00764 312 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 SLC9A3R1O14745 358 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 HNRNPDLO14979 420 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 SLC22A1O15245 554 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 ATMINO43313 823 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 KRT36O76013 467 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 ICAM2P13598 275 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 TCF3P15923 654 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 VCPP55072 806 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 NFX1Q12986 1120 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 NFIL3Q16649 462 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 FBXO43Q4G163 708 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 RNASEH2BQ5TBB1 312 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 KIAA1614Q5VZ46 1190 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 EEF1DP3Q658K8 133 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 CENPPQ6IPU0 288 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 PSRC1Q6PGN9 363 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 AGMOQ6ZNB7 445 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 DEFB128Q7Z7B8 93 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 ADAMTSL2Q86TH1 951 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 RTN4RL1Q86UN2 441 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 CPLX3Q8WVH0 158 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 SLC7A6OSQ96CW6 309 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 CPB2Q96IY4 423 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 OLFM1Q99784 485 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 HAPLN2Q9GZV7 340 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 CLPBQ9H078 707 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 IKZF4Q9H2S9 585 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 ADAM7Q9H2U9 754 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 PLEKHA5Q9HAU0 1116 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 NTN4Q9HB63 628 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 UCKL1Q9NWZ5 548 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 ZDHHC7Q9NXF8 308 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 EMC3Q9P0I2 261 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 APOBEC2Q9Y235 224 aaKnown RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 EPN1Q9Y6I3 576 aaPredicted RBP9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 AK5Q9Y6K8 562 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 RALGAPA2Q2PPJ7 1873 aa9.85□□□□□ -0.83
PDLIM5-207ENST00000503974 CCDC160A6NGH7 325 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 PRSS47A8MTI9 375 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 C9IYK1 514 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 ANKRD63C9JTQ0 380 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 FAM189A1O60320 539 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 EFCAB14O75071 495 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 SULT1C4O75897 302 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 GABBR2O75899 941 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 GARTP22102 1010 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 ADSSP30520 456 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 CTNNA1P35221 906 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 LIG4P49917 911 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 FAM189BP81408 668 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 TAF12Q16514 161 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 RGS21Q2M5E4 152 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 DCAF4L1Q3SXM0 396 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 NADK2Q4G0N4 442 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 SLC27A1Q6PCB7 646 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 POTEHQ6S545 545 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 MPZL3Q6UWV2 235 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 DCP2Q8IU60 420 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 ZC3H3Q8IXZ2 948 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 CRIPAKQ8N1N5 446 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 TTC17Q96AE7 1141 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 TSNARE1Q96NA8 513 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 TSG101Q99816 390 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 CDT1Q9H211 546 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 SEMA6BQ9H3T3 888 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 C10orf88Q9H8K7 445 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 MOV10Q9HCE1 1003 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 AGPAT3Q9NRZ7 376 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 C1orf112Q9NSG2 853 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 SEPT11Q9NVA2 429 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 RRN3Q9NYV6 651 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 ANAPC5Q9UJX4 755 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 STARD13Q9Y3M8 1113 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 TTC3P53804 2025 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 A0A0B4J269 797 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 ABHD14A-ACY1A0A1B0GW23 586 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 TISP43B9A030 160 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 KIAA0391O15091 583 aaKnown RBP9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 ZNF623O75123 536 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 ESRRBO95718 433 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 MCF2P10911 925 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 SFTPCP11686 197 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 CCNE1P24864 410 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 EPHB2P29323 1055 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 MTHFRP42898 656 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 EDRF1Q3B7T1 1238 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 TMEM240Q5SV17 173 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 SLFN12LQ6IEE8 588 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 IZUMO2Q6UXV1 221 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 SLC9A9Q8IVB4 645 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 METTL25Q8N6Q8 603 aa9.84□□□□□ -0.83
PDLIM5-207ENST00000503974 SGK3Q96BR1 496 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms