RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 PRICKLE1Q96MT3 831 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 NAP1L3Q99457 506 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 PAFAH2Q99487 392 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 WDR11Q9BZH6 1224 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 SOX17Q9H6I2 414 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 WDCPQ9H6R7 721 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 GALNT8Q9NY28 637 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 CRIM1Q9NZV1 1036 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 DYRK1BQ9Y463 629 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 PCDHB6Q9Y5E3 794 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 CGNL1Q0VF96 1302 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 COL17A1Q9UMD9 1497 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 FAM47DPA6NHR8 397 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 NPHS1O60500 1241 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 TSPAN1O60635 241 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 CYTIPO60759 359 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 CBX7O95931 251 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 ASGR1P07306 291 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 TPH1P17752 444 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 KCNA5P22460 613 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 SFPQP23246 707 aaKnown RBP eCLIP3.88□□□□□ -1.79
SUB1-202ENST00000502453 RPL13P26373 211 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 SLC16A2P36021 539 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 ETV3P41162 512 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 CEBPZQ03701 1054 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 FUT11Q495W5 492 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 XKR9Q5GH70 373 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 NAIF1Q69YI7 327 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 KIAA1841Q6NSI8 718 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 PTCHD4Q6ZW05 846 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 BNIPLQ7Z465 357 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 MRPL10Q7Z7H8 261 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 WDR49Q8IV35 697 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 NKAIN4Q8IVV8 208 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 ZGPATQ8N5A5 531 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 MAFAQ8NHW3 353 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 SMARCE1Q969G3 411 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 DTNBP1Q96EV8 351 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 MAML3Q96JK9 1138 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 SLC12A9Q9BXP2 914 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 NYXQ9GZU5 481 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 STMN4Q9H169 189 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 SYNDIG1Q9H7V2 258 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 TMEM206Q9H813 350 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 UNKLQ9H9P5 680 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 WDR6Q9NNW5 1121 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 NGBQ9NPG2 151 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 TRPM5Q9NZQ8 1165 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 SEC63Q9UGP8 760 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 DHX29Q7Z478 1369 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 CCDC187A0A096LP49 1063 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 CCDC151A5D8V7 595 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 C22orf46C9J442 243 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 VIPP01282 170 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 S100A9P06702 114 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 CCDC192P0DO97 292 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 CDK4P11802 303 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 ETS1P14921 441 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 PFKLP17858 780 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 ADARP55265 1226 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 TFAP4Q01664 338 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 DMPKQ09013 629 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 TEFQ10587 303 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 IKQ13123 557 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 BYSLQ13895 437 aaKnown RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 MEP1BQ16820 701 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 TYSND1Q2T9J0 566 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 TWISTNBQ3B726 338 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 USH1GQ495M9 461 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 TTC22Q5TAA0 569 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 KCTD1Q719H9 257 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 ADCK2Q7Z695 626 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 TAF8Q7Z7C8 310 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 IRF2BP1Q8IU81 584 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 CCDC105Q8IYK2 499 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 NLGN4XQ8N0W4 816 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.88□□□□□ -1.79
SUB1-202ENST00000502453 KAT2AQ92830 837 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 MCRS1Q96EZ8 462 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 DGAT2Q96PD7 388 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 MGME1Q9BQP7 344 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 MECRQ9BV79 373 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 STRA6Q9BX79 667 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 EPB41L4BQ9H329 900 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 POLR1BQ9H9Y6 1135 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 RRP7BPQ9NSQ0 103 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 RSPH14Q9UHP6 348 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 MTMR6Q9Y217 621 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 COA3Q9Y2R0 106 aaPredicted RBP3.88□□□□□ -1.79
SUB1-202ENST00000502453 GDAQ9Y2T3 454 aa3.88□□□□□ -1.79
SUB1-202ENST00000502453 SENP3-EIF4A1A0A087X0R7 540 aa3.87□□□□□ -1.79
SUB1-202ENST00000502453 RPP40O75818 363 aaKnown RBP3.87□□□□□ -1.79
SUB1-202ENST00000502453 LRIG2O94898 1065 aa3.87□□□□□ -1.79
SUB1-202ENST00000502453 CER1O95813 267 aa3.87□□□□□ -1.79
SUB1-202ENST00000502453 ANXA6P08133 673 aa3.87□□□□□ -1.79
SUB1-202ENST00000502453 LTA4HP09960 611 aaKnown RBP3.87□□□□□ -1.79
SUB1-202ENST00000502453 ACTN1P12814 892 aa3.87□□□□□ -1.79
SUB1-202ENST00000502453 CTNNB1P35222 781 aa3.87□□□□□ -1.79
SUB1-202ENST00000502453 PIK3CGP48736 1102 aa3.87□□□□□ -1.79
SUB1-202ENST00000502453 CLCN4P51793 760 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms