RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ALS2CR12Q96Q35 445 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.65■□□□□ 0.9
CTSD-206ENST00000497544 ANKRD11Q6UB99 2663 aaPredicted RBP20.65■□□□□ 0.9
CTSD-206ENST00000497544 GPR179Q6PRD1 2367 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 GOLGA6L9A6NEM1 432 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 DRGXA6NNA5 263 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 FAM72CH0Y354 149 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 LRIG2O94898 1065 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 PENKP01210 267 aaPredicted RBP20.64■□□□□ 0.89
CTSD-206ENST00000497544 ADRB1P08588 477 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 ARL4AP40617 200 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 ZNF135P52742 658 aaPredicted RBP20.64■□□□□ 0.89
CTSD-206ENST00000497544 KRT81Q14533 505 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 C5orf22Q49AR2 442 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 PPP6R3Q5H9R7 873 aaPredicted RBP20.64■□□□□ 0.89
CTSD-206ENST00000497544 FAM72AQ5TYM5 149 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 FAM72DQ6L9T8 149 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 RWDD4Q6NW29 188 aaKnown RBP20.64■□□□□ 0.89
CTSD-206ENST00000497544 POLNQ7Z5Q5 900 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 RALGPS2Q86X27 583 aaPredicted RBP20.64■□□□□ 0.89
CTSD-206ENST00000497544 FAM72BQ86X60 149 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 ZNF683Q8IZ20 524 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 LRRC57Q8N9N7 239 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 KCTD6Q8NC69 237 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 EXOC4Q96A65 974 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 TBC1D31Q96DN5 1066 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 PRICKLE1Q96MT3 831 aaPredicted RBP20.64■□□□□ 0.89
CTSD-206ENST00000497544 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.64■□□□□ 0.89
CTSD-206ENST00000497544 PPARGC1AQ9UBK2 798 aaKnown RBP20.64■□□□□ 0.89
CTSD-206ENST00000497544 CA14Q9ULX7 337 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 CAPN6Q9Y6Q1 641 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 PIAS3Q9Y6X2 628 aa20.64■□□□□ 0.89
CTSD-206ENST00000497544 SPECC1L-ADORA2AF8WAN1 911 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 DAPK3O43293 454 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 PSTPIP1O43586 416 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 EPHB2P29323 1055 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 SOX9P48436 509 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 SGSHP51688 502 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 CDH6P55285 790 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 TPI1P60174 286 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 PDK2Q15119 407 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 DPYSL2Q16555 572 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 HS1BP3Q53T59 392 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 MAP7D3Q8IWC1 876 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 CCAR2Q8N163 923 aaKnown RBP20.63■□□□□ 0.89
CTSD-206ENST00000497544 CARNMT1Q8N4J0 409 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 KCTD15Q96SI1 283 aaPredicted RBP20.63■□□□□ 0.89
CTSD-206ENST00000497544 ZYG11BQ9C0D3 744 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 DDX56Q9NY93 547 aaKnown RBP20.63■□□□□ 0.89
CTSD-206ENST00000497544 MPP6Q9NZW5 540 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 DOCK4Q8N1I0 1966 aa20.63■□□□□ 0.89
CTSD-206ENST00000497544 IGLV3-10A0A075B6K4 115 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.62■□□□□ 0.89
CTSD-206ENST00000497544 A0A1B0GVM2 712 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 TCAF2A6NFQ2 919 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 H0Y626 953 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 H3BRJ5 948 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 EEF2KO00418 725 aaKnown RBP20.62■□□□□ 0.89
CTSD-206ENST00000497544 CACNG3O60359 315 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 FTCDO95954 541 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 HOXD9P28356 352 aaPredicted RBP20.62■□□□□ 0.89
CTSD-206ENST00000497544 CTHP32929 405 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 HTR7P34969 479 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 SLC6A11P48066 632 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 CDH4P55283 916 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 ZNF177Q13360 481 aaPredicted RBP20.62■□□□□ 0.89
CTSD-206ENST00000497544 MLF2Q15773 248 aaPredicted RBP20.62■□□□□ 0.89
CTSD-206ENST00000497544 PREPLQ4J6C6 727 aaPredicted RBP20.62■□□□□ 0.89
CTSD-206ENST00000497544 MANEALQ5VSG8 457 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 C1orf228Q6PIY5 440 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 NT5DC3Q86UY8 548 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 CIR1Q86X95 450 aaPredicted RBP20.62■□□□□ 0.89
CTSD-206ENST00000497544 ZNF557Q8N988 423 aaPredicted RBP20.62■□□□□ 0.89
CTSD-206ENST00000497544 TRIM58Q8NG06 486 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 UBE2Q2Q8WVN8 375 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 MSANTD3Q96H12 275 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 SHDQ96IW2 340 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 SLC2A11Q9BYW1 496 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 CATSPERBQ9H7T0 1116 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 DNAJC17Q9NVM6 304 aaKnown RBP20.62■□□□□ 0.89
CTSD-206ENST00000497544 DEC1Q9P2X7 70 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 F5P12259 2224 aa20.62■□□□□ 0.89
CTSD-206ENST00000497544 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.61■□□□□ 0.89
CTSD-206ENST00000497544 MAN2B1O00754 1011 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 CLDN11O75508 207 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 CNTN5O94779 1100 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 KDELR1P24390 212 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 EIF2DP41214 584 aaKnown RBP20.61■□□□□ 0.89
CTSD-206ENST00000497544 PRKCQQ04759 706 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 SEMA3BQ13214 749 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 CDH18Q13634 790 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 GAB4Q2WGN9 574 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 TPRG1Q6ZUI0 275 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 MFN1Q8IWA4 741 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 SUMF1Q8NBK3 374 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 P2RY11Q96G91 374 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 CALN1Q9BXU9 219 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 RETREG1Q9H6L5 497 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 PCDH18Q9HCL0 1135 aa20.61■□□□□ 0.89
CTSD-206ENST00000497544 ARHGEF3Q9NR81 526 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms