RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 TMPRSS15P98073 1019 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 TNK2Q07912 1038 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 SELPLGQ14242 412 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 KIZQ2M2Z5 673 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 EFHC2Q5JST6 749 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 SLC9A4Q6AI14 798 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 FOXR2Q6PJQ5 311 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 HAUS6Q7Z4H7 955 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 LHFPL5Q8TAF8 219 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 PDCD6IPQ8WUM4 868 aaKnown RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 SNX19Q92543 992 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 PIK3R3Q92569 461 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 MARC2Q969Z3 335 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 MAGED4Q96JG8 741 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 BTBD6Q96KE9 485 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 SYT11Q9BT88 431 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 CHID1Q9BWS9 393 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 FGFBP2Q9BYJ0 223 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 ADNPQ9H2P0 1102 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 RAD21L1Q9H4I0 556 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 VRTNQ9H8Y1 702 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 DNAJC28Q9NX36 388 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 PSME2Q9UL46 239 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 UGT2B4P06133 528 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 HTR2BP41595 481 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 LEPRP48357 1165 aaKnown RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 ALDH7A1P49419 539 aaKnown RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 ACOT2P49753 483 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 TMBIM6P55061 237 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 HADHBP55084 474 aaKnown RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 MRPS15P82914 257 aaKnown RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 IKQ13123 557 aaPredicted RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 FLOT2Q14254 428 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 HERC3Q15034 1050 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 NEDD8Q15843 81 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 CCDC142Q17RM4 750 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 TTC33Q6PID6 262 aaPredicted RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 KCTD8Q6ZWB6 473 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 CCDC60Q8IWA6 550 aaPredicted RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 MFSD4AQ8N468 514 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 MAGEB6Q8N7X4 407 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 KLHL32Q96NJ5 620 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 HERPUD2Q9BSE4 406 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 IDI2Q9BXS1 227 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 IFT22Q9H7X7 185 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 LIN7BQ9HAP6 207 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 BLOC1S4Q9NUP1 217 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 KCND2Q9NZV8 630 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 DGKBQ9Y6T7 804 aa8□□□□□ -1.13
COL4A5-205ENST00000483338 AFDNP55196 1824 aaKnown RBP8□□□□□ -1.13
COL4A5-205ENST00000483338 ANKRD62A6NC57 917 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 I3L4J1 428 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 HTRA2O43464 458 aaPredicted RBP7.99□□□□□ -1.13
COL4A5-205ENST00000483338 GFAPP14136 432 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 ATF6P18850 670 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 XRCC1P18887 633 aaPredicted RBP7.99□□□□□ -1.13
COL4A5-205ENST00000483338 FGFR3P22607 806 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 GSTM2P28161 218 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 EEF1DP29692 281 aaKnown RBP7.99□□□□□ -1.13
COL4A5-205ENST00000483338 ATXN3P54252 364 aaPredicted RBP7.99□□□□□ -1.13
COL4A5-205ENST00000483338 ITPK1Q13572 414 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 SEC23AQ15436 765 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 Q5BKY6 102 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 TRAPPC3LQ5T215 181 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 ATAD3CQ5T2N8 411 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 FAM171BQ6P995 826 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 DCUN1D2Q6PH85 259 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 SV2BQ7L1I2 683 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 HID1Q8IV36 788 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 GALNT12Q8IXK2 581 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 LINC00518Q8N0U6 118 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 TMEM35BQ8NCS4 154 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 CELF1Q92879 486 aaKnown RBP7.99□□□□□ -1.13
COL4A5-205ENST00000483338 SLC5A5Q92911 643 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 VCPIP1Q96JH7 1222 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 ZFYVE19Q96K21 471 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 RMDN3Q96TC7 470 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 DPEP3Q9H4B8 488 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 ARMT1Q9H993 441 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 CYP26B1Q9NR63 512 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 DUS2Q9NX74 493 aaKnown RBP7.99□□□□□ -1.13
COL4A5-205ENST00000483338 PKD2L2Q9NZM6 624 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 PKD2L1Q9P0L9 805 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 CPNE7Q9UBL6 633 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 HDAC9Q9UKV0 1011 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 NUP50Q9UKX7 468 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 MYO3BQ8WXR4 1341 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 MARF1Q9Y4F3 1742 aaKnown RBP7.99□□□□□ -1.13
COL4A5-205ENST00000483338 COL18A1P39060 1754 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 TEX51A0A1B0GUA7 166 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 PI15O43692 258 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 PIK3R1P27986 724 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 RBL1P28749 1068 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 GPX6P59796 221 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 MCCD1P59942 119 aaPredicted RBP7.99□□□□□ -1.13
COL4A5-205ENST00000483338 MS4A2Q01362 244 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 OCA2Q04671 838 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 TARDBPQ13148 414 aaKnown RBP eCLIP7.99□□□□□ -1.13
COL4A5-205ENST00000483338 NHSL2Q5HYW2 709 aa7.99□□□□□ -1.13
COL4A5-205ENST00000483338 KCNT1Q5JUK3 1230 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms