RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 PRSS16Q9NQE7 514 aa14.09□□□□□ -0.15
RAB5A-208ENST00000476544 SEPT11Q9NVA2 429 aaKnown RBP14.09□□□□□ -0.15
RAB5A-208ENST00000476544 MPP6Q9NZW5 540 aa14.09□□□□□ -0.15
RAB5A-208ENST00000476544 KIAA1522Q9P206 1035 aaPredicted RBP14.09□□□□□ -0.15
RAB5A-208ENST00000476544 STAP1Q9ULZ2 295 aa14.09□□□□□ -0.15
RAB5A-208ENST00000476544 TBC1D30Q9Y2I9 924 aa14.09□□□□□ -0.15
RAB5A-208ENST00000476544 NPC1O15118 1278 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 ALDH1A2O94788 518 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 CALB1P05937 261 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 CCDC172P0C7W6 258 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 CASP14P31944 242 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 PLEKHG6Q3KR16 790 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 MANEALQ5VSG8 457 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 SDE2Q6IQ49 451 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 GAS2L3Q86XJ1 694 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 CCDC185Q8N715 623 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 RPRD1AQ96P16 312 aaPredicted RBP14.08□□□□□ -0.16
RAB5A-208ENST00000476544 FEM1AQ9BSK4 669 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 ITM2CQ9NQX7 267 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 ARHGAP20Q9P2F6 1191 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 ADAMTS1Q9UHI8 967 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 NENFQ9UMX5 172 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 PLA2G4CQ9UP65 541 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 NEU3Q9UQ49 428 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 ERVW-1Q9UQF0 538 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 SDK1Q7Z5N4 2213 aa14.08□□□□□ -0.16
RAB5A-208ENST00000476544 A0A087X0T9 212 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 IGHV1OR15-9A0A0B4J2B8 117 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 TMEM191CA6NGB0 347 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 TTC34A8MYJ7 566 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 H0Y626 953 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 FAM228BP0C875 321 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 POLR2EP19388 210 aaKnown RBP14.07□□□□□ -0.16
RAB5A-208ENST00000476544 HNRNPH3P31942 346 aaKnown RBP14.07□□□□□ -0.16
RAB5A-208ENST00000476544 ZNF143P52747 638 aaPredicted RBP14.07□□□□□ -0.16
RAB5A-208ENST00000476544 TPM4P67936 248 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 ZNF252P-AS1Q0IIN9 211 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 SPEM2Q0P670 501 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 CCDC6Q16204 474 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 CDO1Q16878 200 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 PLA2G2CQ5R387 149 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 C9orf64Q5T6V5 341 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 STRADAQ7RTN6 431 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 METTL3Q86U44 580 aaKnown RBP14.07□□□□□ -0.16
RAB5A-208ENST00000476544 TMPRSS6Q8IU80 811 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 KIAA2013Q8IYS2 634 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 PYROXD2Q8N2H3 581 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 FAM172AQ8WUF8 416 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 UCMAQ8WVF2 138 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 RPL10LQ96L21 214 aaKnown RBP14.07□□□□□ -0.16
RAB5A-208ENST00000476544 FAM129BQ96TA1 746 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 PSMB7Q99436 277 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 SELENOOQ9BVL4 669 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 OSBPL2Q9H1P3 480 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 ARRDC1-AS1Q9H2J1 176 aa14.07□□□□□ -0.16
RAB5A-208ENST00000476544 DMXL1Q9Y485 3027 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
RAB5A-208ENST00000476544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 A0A0D9SEW6 157 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 A0A1B0GVM2 712 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 TCAF2A6NFQ2 919 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 E9PAM4 449 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 CCP110O43303 1012 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 ATMINO43313 823 aaPredicted RBP14.06□□□□□ -0.16
RAB5A-208ENST00000476544 SRGAP2O75044 1071 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 RTN2O75298 545 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 CLDN11O75508 207 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 MT-CO1P00395 513 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 ATP5BP06576 529 aaKnown RBP14.06□□□□□ -0.16
RAB5A-208ENST00000476544 EPHX1P07099 455 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 VAV1P15498 845 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 GPD1P21695 349 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 SDC4P31431 198 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 PTGER3P43115 390 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 STK19P49842 368 aaPredicted RBP14.06□□□□□ -0.16
RAB5A-208ENST00000476544 CDH4P55283 916 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 ECT2LQ008S8 904 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 NRG1Q02297 640 aaPredicted RBP14.06□□□□□ -0.16
RAB5A-208ENST00000476544 MTA1Q13330 715 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
RAB5A-208ENST00000476544 CDH18Q13634 790 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 ARID5BQ14865 1188 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 ASTE1Q2TB18 679 aaPredicted RBP14.06□□□□□ -0.16
RAB5A-208ENST00000476544 PMS2CLQ68D20 193 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 SERPINA13PQ6UXR4 307 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 SND1Q7KZF4 910 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAB5A-208ENST00000476544 TMEFF1Q8IYR6 380 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 PGBD3Q8N328 593 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 DEFB119Q8N690 84 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 FRS2Q8WU20 508 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 PTPRN2Q92932 1015 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 LOXL4Q96JB6 756 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 MCEEQ96PE7 176 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 RBSNQ9H1K0 784 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 SMOC1Q9H4F8 434 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 RXFP3Q9NSD7 469 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 TMEM74BQ9NUR3 256 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 NDFIP2Q9NV92 336 aa14.06□□□□□ -0.16
RAB5A-208ENST00000476544 USP36Q9P275 1121 aaKnown RBP14.06□□□□□ -0.16
RAB5A-208ENST00000476544 BCCIPQ9P287 314 aaKnown RBP eCLIP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms