RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 NEDD9Q14511 834 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 STK38Q15208 465 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ST3GAL2Q16842 350 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 UGT8Q16880 541 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 Q4G0T1 1027 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 CEP55Q53EZ4 464 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ATAT1Q5SQI0 421 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 CES5AQ6NT32 575 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 RSPH3Q86UC2 560 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SYT12Q8IV01 421 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 FAM177A1Q8N128 213 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 BICD2Q8TD16 824 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 DNAJB3Q8WWF6 145 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 CASP10Q92851 521 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 PCYT2Q99447 389 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 PLIN2Q99541 437 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 NDC1Q9BTX1 674 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 APOL5Q9BWW9 433 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 MFSD1Q9H3U5 465 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 CWH43Q9H720 699 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ERVK-5Q9HDB9 667 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 TYW1Q9NV66 732 aaKnown RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 DLGAP2Q9P1A6 1054 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 DPP7Q9UHL4 492 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 PADI3Q9ULW8 664 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 MAPRE3Q9UPY8 281 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 R4GN57 208 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 KDM3AQ9Y4C1 1321 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 BAHCC1Q9P281 2608 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 A0A1B0GVL5 298 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 PRR5-ARHGAP8B1AHC4 643 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ZNF185O15231 689 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 CHMP2AO43633 222 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 MED24O75448 989 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 STAM2O75886 525 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 NCR1O76036 304 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 RECQL4O94761 1208 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ABHD16AO95870 558 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 FOSP01100 380 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SP9P0CG40 484 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 GYPEP15421 78 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 PFKFB1P16118 471 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SP100P23497 879 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 CTSSP25774 331 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ADSLP30566 484 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 TRAPPC10P48553 1259 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 NDUFA8P51970 172 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 CALCRLQ16602 461 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 FAM102BQ5T8I3 360 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 PPP4R3AQ6IN85 833 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 MOXD1Q6UVY6 613 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 LRRC55Q6ZSA7 311 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SLC24A5Q71RS6 500 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 RHOUQ7L0Q8 258 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 THNSL2Q86YJ6 484 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 GRAMD1CQ8IYS0 662 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 MAML2Q8IZL2 1156 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 NME8Q8N427 588 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 COLGALT1Q8NBJ5 622 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ENGASEQ8NFI3 743 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SLC22A17Q8WUG5 538 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SNX33Q8WV41 574 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ZG16BQ96DA0 208 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ZBTB10Q96DT7 871 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SH2D3AQ9BRG2 576 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 PANK2Q9BZ23 570 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 IFT22Q9H7X7 185 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 RGS18Q9NS28 235 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 RGL1Q9NZL6 768 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ANKFY1Q9P2R3 1169 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 ZNF215Q9UL58 517 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 NOL7Q9UMY1 257 aaKnown RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 DUSP12Q9UNI6 340 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 HPSEQ9Y251 543 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 PCDHB7Q9Y5E2 793 aa3.97□□□□□ -1.77
SCFD1-204ENST00000463622 SRPRBQ9Y5M8 271 aaKnown RBP3.97□□□□□ -1.77
SCFD1-204ENST00000463622 IGSF9BQ9UPX0 1349 aa3.96□□□□□ -1.77
SCFD1-204ENST00000463622 PKD1L2Q7Z442 2459 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-204ENST00000463622 GSTTP1A0A1W2PQM5 241 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 RRN3P2A6NIE6 340 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 MGEA5O60502 916 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 PPP6R2O75170 966 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 STBD1O95210 358 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 LAG3P18627 525 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 CCND2P30279 289 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 ME1P48163 572 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 ARHGAP8P85298 464 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 NHLH2Q02577 135 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 CYP4A11Q02928 519 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 COL10A1Q03692 680 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 PPFIA1Q13136 1202 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 MTMR1Q13613 665 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 KARSQ15046 597 aaKnown RBP3.96□□□□□ -1.78
SCFD1-204ENST00000463622 TIGD2Q4W5G0 525 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 UTP14CQ5TAP6 766 aaKnown RBP3.96□□□□□ -1.78
SCFD1-204ENST00000463622 RESP18Q5W5W9 173 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 NCAPH2Q6IBW4 605 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 XRRA1Q6P2D8 792 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 THNSL1Q8IYQ7 743 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms