RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 TSC2P49815 1807 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SLC38A8A6NNN8 435 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 O00370 1275 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 DYNC1I1O14576 645 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ZNF197O14709 1029 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 GIPC1O14908 333 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 XPO1O14980 1071 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 GSC2O15499 205 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SOAT2O75908 522 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 RTN3O95197 1032 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 FGF19O95750 216 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 IGLV1-40P01703 118 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 MYL4P12829 197 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 PTPN2P17706 415 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 KCNA5P22460 613 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 GSTT1P30711 240 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 MTHFRP42898 656 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ACADSBP45954 432 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 GPR15P49685 360 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 JAM2P57087 298 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 CDR2Q01850 454 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ITIH3Q06033 890 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 CCDC142Q17RM4 750 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 AAK1Q2M2I8 961 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 PABPC1LQ4VXU2 614 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SDHAF4Q5VUM1 108 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 PPP1R2P3Q6NXS1 205 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ERAP2Q6P179 960 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 TMC5Q6UXY8 1006 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 TRIM72Q6ZMU5 477 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 DENND5BQ6ZUT9 1274 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 PDZD4Q76G19 769 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SLC47A2Q86VL8 602 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SPATS2Q86XZ4 545 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ZNF354CQ86Y25 554 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 CNGA4Q8IV77 575 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 KRT222Q8N1A0 295 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 NUP93Q8N1F7 819 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 TTC9BQ8N6N2 239 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 C12orf76Q8N812 135 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SPC24Q8NBT2 197 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 LEMD2Q8NC56 503 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 CMASQ8NFW8 434 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 VN1R2Q8NFZ6 395 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 OR8K1Q8NGG5 319 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ANKRD49Q8WVL7 239 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 TFAP2BQ92481 460 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SYN2Q92777 582 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 RNF34Q969K3 372 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ATP6V1E2Q96A05 226 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SPATA17Q96L03 361 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 AGPAT1Q99943 283 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 TACO1Q9BSH4 297 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 RHOBTB2Q9BYZ6 727 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 UBXN6Q9BZV1 441 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SLC7A5P2Q9GIP4 190 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 GPR88Q9GZN0 384 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ADAM7Q9H2U9 754 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 FBXO44Q9H4M3 255 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 SYNCQ9H7C4 482 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 UBE2ZQ9H832 354 aaPredicted RBP6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 PNPLA8Q9NP80 782 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ASAH2Q9NR71 780 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 ST7Q9NRC1 585 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 AIPL1Q9NZN9 384 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 IMPACTQ9P2X3 320 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 CD207Q9UJ71 328 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 AP4E1Q9UPM8 1137 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 CEP290O15078 2479 aa6.44□□□□□ -1.38
ECHDC1-208ENST00000436638 MKI67P46013 3256 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 GOLGA6L10A0A0M3HER8 536 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 LINC00854A0A1B0GVQ3 168 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 H3BQ06 376 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 MFAP3LO75121 409 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 TBX10O75333 385 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 RFPL2O75678 378 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 VNN2O95498 520 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 GLP2RO95838 553 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 CALCAP01258 141 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 GYPCP04921 128 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 SERPING1P05155 500 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 POU2F2P09086 479 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 ADH5P11766 374 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 RAC2P15153 192 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 ZNF24P17028 368 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 ATF6P18850 670 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 YWHAQP27348 245 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 CDC25CP30307 473 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 HPDP32754 393 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 PRKCIP41743 596 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 SLC5A3P53794 718 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 ADKP55263 362 aaKnown RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 GSCP56915 257 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 GSDMDP57764 484 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 GABPB1Q06547 395 aaPredicted RBP6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 CCDC173Q0VFZ6 552 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 KCNC3Q14003 757 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 CLUL1Q15846 466 aa6.43□□□□□ -1.38
ECHDC1-208ENST00000436638 MEA1Q16626 185 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms