RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 RSPH1Q8WYR4 309 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 MYD88Q99836 296 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 ALDH8A1Q9H2A2 487 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 MLXIPLQ9NP71 852 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 CLIC5Q9NZA1 410 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 PHTF1Q9UMS5 762 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 NOL7Q9UMY1 257 aaKnown RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 CEP83Q9Y592 693 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 ABCC2Q92887 1545 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZNF608Q9ULD9 1512 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 PLXNC1O60486 1568 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 ARHGEF5Q12774 1597 aa4.14□□□□□ -1.75
HMGB3P23-201ENST00000414981 PRAG1Q86YV5 1406 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 SYNJ2O15056 1496 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 ABCC10Q5T3U5 1492 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 CCDC141Q6ZP82 1450 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 PRDM15P57071 1507 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 GPATCH8Q9UKJ3 1502 aaKnown RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 GOLGA6L3A6NEY3 463 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 MYMKA6NI61 221 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 C2CD4BA6NLJ0 364 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 NPC1O15118 1278 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 KCNAB3O43448 404 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 MYL3P08590 195 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 VPS41P49754 854 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 AGTR2P50052 363 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 TMF1P82094 1093 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 B4GALNT1Q00973 533 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 NEXNQ0ZGT2 675 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 CSHL1Q14406 222 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 TRIM71Q2Q1W2 868 aaKnown RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 FAM83BQ5T0W9 1011 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 FAM57BQ71RH2 274 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZSCAN30Q86W11 494 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 SPICE1Q8N0Z3 855 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 OTUD6BQ8N6M0 293 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 ARFGAP1Q8N6T3 406 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 PAF1Q8N7H5 531 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 NRACQ8N912 160 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 CCDC89Q8N998 374 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 TEX19Q8NA77 164 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 SNRNP27Q8WVK2 155 aaKnown RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 ASB12Q8WXK4 309 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 ERP27Q96DN0 273 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 TRMT61AQ96FX7 289 aaKnown RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 NAF1Q96HR8 494 aaKnown RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 EIF3CQ99613 913 aaKnown RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 PNNQ9H307 717 aaKnown RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 CDCP1Q9H5V8 836 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 RETREG1Q9H6L5 497 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 ERVK-5Q9HDB9 667 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 POT1Q9NUX5 634 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 ASNSD1Q9NWL6 643 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 CWC25Q9NXE8 425 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 HEY2Q9UBP5 337 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZNF69Q9UC07 566 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 POLG2Q9UHN1 485 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 HS3ST3B1Q9Y662 390 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 TRPM1Q7Z4N2 1603 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 RAPGEF6Q8TEU7 1601 aa4.13□□□□□ -1.75
HMGB3P23-201ENST00000414981 NKTRP30414 1462 aaKnown RBP4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 NUP153P49790 1475 aaKnown RBP4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 URB2Q14146 1524 aaKnown RBP4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 ADAMTS12P58397 1594 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 NEURL4Q96JN8 1562 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 PNMA6EA0A0J9YXQ4 647 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 GXYLT2A0PJZ3 443 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 PODXLO00592 558 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 NPHP1O15259 732 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 PRPF4O43172 522 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 FRAT2O75474 233 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 TFEBP19484 476 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 SOX2P48431 317 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 HSPA7P48741 367 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 CCT4P50991 539 aaKnown RBP4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 FOXG1P55316 489 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 BTKQ06187 659 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 MTA1Q13330 715 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 RAB30Q15771 203 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 MPEG1Q2M385 716 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 GRAMD1BQ3KR37 738 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 DGKKQ5KSL6 1271 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 MSANTD2Q6P1R3 559 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 FBXO38Q6PIJ6 1188 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 KRT77Q7Z794 578 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 RFX6Q8HWS3 928 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 DEPTORQ8TB45 409 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 PARD3BQ8TEW8 1205 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 TNIP3Q96KP6 325 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 TUBB6Q9BUF5 446 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 TTLL2Q9BWV7 592 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 PDCL3Q9H2J4 239 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 KCNK9Q9NPC2 374 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 FBXO28Q9NVF7 368 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 TMEM45AQ9NWC5 275 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 CHMP5Q9NZZ3 219 aa4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 CFDP1Q9UEE9 299 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P23-201ENST00000414981 TARBP1Q13395 1621 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms