RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 SLC38A7Q9NVC3 462 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 FESP07332 822 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 SP100P23497 879 aaPredicted RBP24.37■■□□□ 1.49
PABPN1-202ENST00000397276 CALRP27797 417 aaKnown RBP24.37■■□□□ 1.49
PABPN1-202ENST00000397276 CCNFP41002 786 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 LHX1P48742 406 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 MRPS35P82673 323 aaKnown RBP24.37■■□□□ 1.49
PABPN1-202ENST00000397276 CDK16Q00536 496 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 KPNB1Q14974 876 aaKnown RBP24.37■■□□□ 1.49
PABPN1-202ENST00000397276 PAFAH1B3Q15102 231 aaKnown RBP24.37■■□□□ 1.49
PABPN1-202ENST00000397276 TIGD5Q53EQ6 642 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 SLC30A9Q6PML9 568 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 AGMOQ6ZNB7 445 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 ANKRD27Q96NW4 1050 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 AGO3Q9H9G7 860 aaKnown RBP24.37■■□□□ 1.49
PABPN1-202ENST00000397276 TRPV2Q9Y5S1 764 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 RPS6KL1Q9Y6S9 549 aa24.37■■□□□ 1.49
PABPN1-202ENST00000397276 LTFP02788 710 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 RASSF2P50749 326 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 ACSBG2Q5FVE4 666 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 APOL2Q9BQE5 337 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 DCLRE1BQ9H816 532 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 TPP1O14773 563 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 NVLO15381 856 aaKnown RBP24.36■■□□□ 1.49
PABPN1-202ENST00000397276 AKR1A1P14550 325 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 ACADSP16219 412 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 CCDC6Q16204 474 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 SNX30Q5VWJ9 437 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 AP1ARQ63HQ0 302 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 FAM136AQ96C01 138 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 APBA2Q99767 749 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 XPNPEP3Q9NQH7 507 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 UBP1Q9NZI7 540 aa24.36■■□□□ 1.49
PABPN1-202ENST00000397276 MTO1Q9Y2Z2 717 aaKnown RBP24.36■■□□□ 1.49
PABPN1-202ENST00000397276 TRAFD1O14545 582 aaPredicted RBP24.35■■□□□ 1.49
PABPN1-202ENST00000397276 ALDOAP04075 364 aaKnown RBP24.35■■□□□ 1.49
PABPN1-202ENST00000397276 MLNP12872 115 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 BDNFP23560 247 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 PTPN3P26045 913 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 HOXC8P31273 242 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 CRHR1P34998 444 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 BRCC3P46736 316 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 SERPINB9P50453 376 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 PAPOLAP51003 745 aaKnown RBP24.35■■□□□ 1.49
PABPN1-202ENST00000397276 TSNAXIP1Q2TAA8 658 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 PPM1JQ5JR12 505 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 C17orf99Q6UX52 265 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 PACS1Q6VY07 963 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 CDKL2Q92772 493 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 TKTL2Q9H0I9 626 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 FBXW11Q9UKB1 542 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 B3GAT3O94766 335 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 TGDSO95455 350 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 PDE1BQ01064 536 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 DNAAF3Q8N9W5 541 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 WDR60Q8WVS4 1066 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 RNF34Q969K3 372 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 COLEC11Q9BWP8 271 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 WDCPQ9H6R7 721 aa24.35■■□□□ 1.49
PABPN1-202ENST00000397276 ZBTB24O43167 697 aaPredicted RBP24.34■■□□□ 1.49
PABPN1-202ENST00000397276 ALDH1A2O94788 518 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 PGAM1P18669 254 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 CTGFP29279 349 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 RCN2Q14257 317 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 SCG3Q8WXD2 468 aaKnown RBP24.34■■□□□ 1.49
PABPN1-202ENST00000397276 CELF6Q96J87 481 aaKnown RBP24.34■■□□□ 1.49
PABPN1-202ENST00000397276 ZCWPW1Q9H0M4 648 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 CNGB3Q9NQW8 809 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 INPP5FQ9Y2H2 1132 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 FBXO21O94952 628 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 NIPAL4Q0D2K0 466 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 ATG16L1Q676U5 607 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 STEAP4Q687X5 459 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 RASSF3Q86WH2 238 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 PPP1R14CQ8TAE6 165 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 MYLPFQ96A32 169 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 SKA1Q96BD8 255 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 FCRL3Q96P31 734 aaPredicted RBP24.34■■□□□ 1.49
PABPN1-202ENST00000397276 PPP1R12CQ9BZL4 782 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 NMUR2Q9GZQ4 415 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 TLE6Q9H808 572 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 SIRPGQ9P1W8 387 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 Q9Y3F1 56 aa24.34■■□□□ 1.49
PABPN1-202ENST00000397276 AHCYL1O43865 530 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 KCNA4P22459 653 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 ABCG1P45844 678 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 OR12D3Q9UGF7 316 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 KLF11O14901 512 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 ATP9BO43861 1147 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 SNUPNO95149 360 aaKnown RBP24.33■■□□□ 1.49
PABPN1-202ENST00000397276 BPGMP07738 259 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 SRGAP2BP0DMP2 458 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 CD52P31358 61 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 RPL10AP62906 217 aaKnown RBP24.33■■□□□ 1.49
PABPN1-202ENST00000397276 PDE1CQ14123 709 aaPredicted RBP24.33■■□□□ 1.49
PABPN1-202ENST00000397276 HSF5Q4G112 596 aaPredicted RBP24.33■■□□□ 1.49
PABPN1-202ENST00000397276 N4BP2L1Q5TBK1 243 aaPredicted RBP24.33■■□□□ 1.49
PABPN1-202ENST00000397276 RASAL3Q86YV0 1011 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 TMEM86AQ8N2M4 240 aa24.33■■□□□ 1.49
PABPN1-202ENST00000397276 TMEM209Q96SK2 561 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms