RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 TUBA1CQ9BQE3 449 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 SELENOOQ9BVL4 669 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.33□□□□□ -2.2
SNORA40-201ENST00000388090 UBXN6Q9BZV1 441 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 ZNF518BQ9C0D4 1074 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 ZNF334Q9HCZ1 680 aaPredicted RBP1.33□□□□□ -2.2
SNORA40-201ENST00000388090 PNRC2Q9NPJ4 139 aaKnown RBP1.33□□□□□ -2.2
SNORA40-201ENST00000388090 ZFP57Q9NU63 452 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 PRR34Q9NV39 138 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 FAM120CQ9NX05 1096 aaKnown RBP1.33□□□□□ -2.2
SNORA40-201ENST00000388090 PAK5Q9P286 719 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 IL36RNQ9UBH0 155 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 DKK4Q9UBT3 224 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 AGO1Q9UL18 857 aaKnown RBP1.33□□□□□ -2.2
SNORA40-201ENST00000388090 SLC8A2Q9UPR5 921 aa1.33□□□□□ -2.2
SNORA40-201ENST00000388090 TPP1O14773 563 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 AP1G1O43747 822 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 SLC8A1P32418 973 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 TNFSF8P32971 234 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 IGHMBP2P38935 993 aaKnown RBP1.32□□□□□ -2.2
SNORA40-201ENST00000388090 PBX1P40424 430 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 DGKQP52824 942 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 LINC01547P58512 204 aaPredicted RBP1.32□□□□□ -2.2
SNORA40-201ENST00000388090 MYBPHQ13203 477 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 PPIGQ13427 754 aaKnown RBP eCLIP1.32□□□□□ -2.2
SNORA40-201ENST00000388090 FGL2Q14314 439 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 ACCSLQ4AC99 568 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 TAF7LQ5H9L4 462 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 C19orf48Q6RUI8 117 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 P2RY8Q86VZ1 359 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 FSTL5Q8N475 847 aaPredicted RBP1.32□□□□□ -2.2
SNORA40-201ENST00000388090 EXD3Q8N9H8 876 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 KBTBD3Q8NAB2 608 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 PJA1Q8NG27 643 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 ATL2Q8NHH9 583 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 SUN3Q8TAQ9 357 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 BICD2Q8TD16 824 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 SECTM1Q8WVN6 248 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 ZNF419Q96HQ0 510 aaPredicted RBP1.32□□□□□ -2.2
SNORA40-201ENST00000388090 FEM1CQ96JP0 617 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 GPR78Q96P69 363 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 GTPBP4Q9BZE4 634 aaKnown RBP1.32□□□□□ -2.2
SNORA40-201ENST00000388090 TMX1Q9H3N1 280 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 FAM83DQ9H4H8 585 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 RNF146Q9NTX7 359 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 STXBP5LQ9Y2K9 1186 aa1.32□□□□□ -2.2
SNORA40-201ENST00000388090 COL5A2P05997 1499 aaPredicted RBP1.31□□□□□ -2.2
SNORA40-201ENST00000388090 A0A088AWK7 358 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 MBD3L4A6NDZ8 208 aaPredicted RBP1.31□□□□□ -2.2
SNORA40-201ENST00000388090 MBD3L3A6NE82 208 aaPredicted RBP1.31□□□□□ -2.2
SNORA40-201ENST00000388090 FGF17O60258 216 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 PPP6R2O75170 966 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 IL18RAPO95256 599 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 VIL1P09327 827 aaKnown RBP1.31□□□□□ -2.2
SNORA40-201ENST00000388090 THPOP40225 353 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 KCNAB1Q14722 419 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 ELF2Q15723 593 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 PLEKHO1Q53GL0 409 aaPredicted RBP1.31□□□□□ -2.2
SNORA40-201ENST00000388090 MANEALQ5VSG8 457 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 FAM90A2PQ658T7 463 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 ARHGAP17Q68EM7 881 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 ABLIM2Q6H8Q1 611 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 UNQ6126/PRO20091Q6UXV3 157 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 PP632Q6XCG6 107 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 HAPLN4Q86UW8 402 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 OR52L2PQ8NGH6 319 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 MBD3L2Q8NHZ7 208 aaPredicted RBP1.31□□□□□ -2.2
SNORA40-201ENST00000388090 MVB12AQ96EY5 273 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 CGRRF1Q99675 332 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 CDK19Q9BWU1 502 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 B3GNT4Q9C0J1 378 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 KLHL31Q9H511 634 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 COL20A1Q9P218 1284 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 TRHDEQ9UKU6 1024 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 B3GNT3Q9Y2A9 372 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 RNF215Q9Y6U7 377 aa1.31□□□□□ -2.2
SNORA40-201ENST00000388090 IGHV4-28A0A0C4DH34 117 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 CXorf65A6NEN9 183 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 AQP7P3A6NL99 342 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 STMND1H3BQB6 276 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 PYCARD-AS1I3L0S3 204 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 SERPINI2O75830 405 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 NAGAP17050 411 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 EN2P19622 333 aaPredicted RBP1.3□□□□□ -2.2
SNORA40-201ENST00000388090 MARK3P27448 753 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 CPT1AP50416 773 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 LUMP51884 338 aaPredicted RBP1.3□□□□□ -2.2
SNORA40-201ENST00000388090 ZNF132P52740 706 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 ALG10Q5BKT4 473 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 ALG10BQ5I7T1 473 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 EFHC1Q5JVL4 640 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 TMEM71Q6P5X7 295 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 STXBP4Q6ZWJ1 553 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 SLC26A9Q7LBE3 791 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 KRT26Q7Z3Y9 468 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 NECAB2Q7Z6G3 386 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 ADAD2Q8NCV1 583 aaKnown RBP1.3□□□□□ -2.2
SNORA40-201ENST00000388090 DEPTORQ8TB45 409 aa1.3□□□□□ -2.2
SNORA40-201ENST00000388090 GRAPLQ8TC17 118 aaPredicted RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms