RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 FAM86B2P0C5J1 330 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 EGR2P11161 476 aaPredicted RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 OSMP13725 252 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 TCP1P17987 556 aaKnown RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 AGXTP21549 392 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 FBLP22087 321 aaKnown RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 GCSHP23434 173 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 CHRNA5P30532 468 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 MAGEA1P43355 309 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 ALDH1A3P47895 512 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 VSNL1P62760 191 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 SETQ01105 290 aaPredicted RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 GHRHRQ02643 423 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 IKQ13123 557 aaPredicted RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 KLF1Q13351 362 aaPredicted RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 PPP2R5CQ13362 524 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 TP53BP2Q13625 1128 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 GIT2Q14161 759 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 USH1GQ495M9 461 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 SLC9C1Q4G0N8 1177 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 FAM83BQ5T0W9 1011 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 NCAPH2Q6IBW4 605 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 MED25Q71SY5 747 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 RRAGAQ7L523 313 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 CACNA2D4Q7Z3S7 1137 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 FAM160B2Q86V87 743 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 DDX42Q86XP3 938 aaKnown RBP eCLIP5.15□□□□□ -1.59
USP48-202ENST00000374730 NOA1Q8NC60 698 aaKnown RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 ATL2Q8NHH9 583 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 NEK9Q8TD19 979 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 COG1Q8WTW3 980 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 CHURC1Q8WUH1 139 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 EEF2KMTQ96G04 330 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 PRMT6Q96LA8 375 aaPredicted RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 ALS2CR12Q96Q35 445 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 RPS6KC1Q96S38 1066 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 REEP2Q9BRK0 252 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 IFIH1Q9BYX4 1025 aaKnown RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 GANQ9H2C0 597 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 RNPEPQ9H4A4 650 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 VCPKMTQ9H867 229 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 VIPAS39Q9H9C1 493 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 PLCB1Q9NQ66 1216 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 FAM207AQ9NSI2 230 aaPredicted RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 ZNF70Q9UC06 446 aaPredicted RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 FBXL5Q9UKA1 691 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 AJAP1Q9UKB5 411 aaPredicted RBP5.15□□□□□ -1.59
USP48-202ENST00000374730 PRDM4Q9UKN5 801 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 HDAC9Q9UKV0 1011 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 SNX12Q9UMY4 172 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 L1RE1Q9UN81 338 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 RABGAP1Q9Y3P9 1069 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 JRKLQ9Y4A0 524 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.15□□□□□ -1.59
USP48-202ENST00000374730 FRMPD4Q14CM0 1322 aa5.15□□□□□ -1.59
USP48-202ENST00000374730 COL11A1P12107 1806 aaPredicted RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 CEP350Q5VT06 3117 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 ZAR1LA6NP61 321 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 BTNL10A8MVZ5 291 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 GCOM1H8Y6P7 765 aaPredicted RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 TSPAN6O43657 245 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 CREB3O43889 395 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 TLR2O60603 784 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 TBCAO75347 108 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 GPR32O75388 356 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 PSMD10O75832 226 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 NUDT3O95989 172 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 AFPP02771 609 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 TFRCP02786 760 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 ELANEP08246 267 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 POLR2MP0CAP2 368 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 TYRP1P17643 537 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 NR2F2P24468 414 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 OAS2P29728 719 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 HOXD13P35453 343 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 GNALP38405 381 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 PRKCIP41743 596 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 SLC6A9P48067 706 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 CASP5P51878 434 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 PRELPP51888 382 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 ZNF131P52739 623 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 SEC24CP53992 1094 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 SNAP25P60880 206 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 GPS2Q13227 327 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 SMC1AQ14683 1233 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 DLGAP5Q15398 846 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 ASIC2Q16515 512 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 KNOP1Q1ED39 458 aaKnown RBP5.14□□□□□ -1.59
USP48-202ENST00000374730 SPDYE7PQ495Y7 208 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 MAP9Q49MG5 647 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 C10orf76Q5T2E6 689 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 SFMBT2Q5VUG0 894 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 LRCH2Q5VUJ6 765 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 DPY19L2P1Q6NXN4 242 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 OLFML1Q6UWY5 402 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 B3GNT9Q6UX72 402 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 NECAB2Q7Z6G3 386 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 SFR1Q86XK3 245 aa5.14□□□□□ -1.59
USP48-202ENST00000374730 NELFCDQ8IXH7 590 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms