RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TMEM209Q96SK2 561 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 RTP3Q9BQQ7 232 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 MLPHQ9BV36 600 aaPredicted RBP24.42■■□□□ 1.5
CDK9-201ENST00000373264 ACSS2Q9NR19 701 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 KCNK4Q9NYG8 393 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 FBXW11Q9UKB1 542 aa24.42■■□□□ 1.5
CDK9-201ENST00000373264 ATP9BO43861 1147 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 PCLAFQ15004 111 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 GPR162Q16538 588 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 CST9Q5W186 159 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 GDF6Q6KF10 455 aaPredicted RBP24.41■■□□□ 1.5
CDK9-201ENST00000373264 CRLF3Q8IUI8 442 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 C10orf107Q8IVU9 208 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 PLD6Q8N2A8 252 aaKnown RBP24.41■■□□□ 1.5
CDK9-201ENST00000373264 TRPV1Q8NER1 839 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 PPP1R14CQ8TAE6 165 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 MOCOSQ96EN8 888 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 AGO3Q9H9G7 860 aaKnown RBP24.41■■□□□ 1.5
CDK9-201ENST00000373264 EIF2B3Q9NR50 452 aaKnown RBP24.41■■□□□ 1.5
CDK9-201ENST00000373264 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.41■■□□□ 1.5
CDK9-201ENST00000373264 TTC3P53804 2025 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 CAPN14A8MX76 684 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 PGK1P00558 417 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 CHRNA1P02708 482 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 LTFP02788 710 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 SESN3P58005 492 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 MRPS6P82932 125 aaKnown RBP24.41■■□□□ 1.5
CDK9-201ENST00000373264 AGMOQ6ZNB7 445 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 TNS4Q8IZW8 715 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 SHKBP1Q8TBC3 707 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 CERS2Q96G23 380 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 COLEC11Q9BWP8 271 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 TKTL2Q9H0I9 626 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 TMLHEQ9NVH6 421 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 IGSF9Q9P2J2 1179 aa24.41■■□□□ 1.5
CDK9-201ENST00000373264 PLIN3O60664 434 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 POMCP01189 267 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 THP07101 528 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 HOXC8P31273 242 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 BRCC3P46736 316 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 TAF1CQ15572 869 aaPredicted RBP24.4■■□□□ 1.5
CDK9-201ENST00000373264 TEDDM1Q5T9Z0 273 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 CLPTM1LQ96KA5 538 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 RILPQ96NA2 401 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 OXCT2Q9BYC2 517 aaPredicted RBP24.4■■□□□ 1.5
CDK9-201ENST00000373264 DNAJC16Q9Y2G8 782 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 CTGFP29279 349 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 ACSBG2Q5FVE4 666 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 ARHGAP36Q6ZRI8 547 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 CYS1Q717R9 158 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 DNAAF3Q8N9W5 541 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 USP33Q8TEY7 942 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 CDKL2Q92772 493 aa24.4■■□□□ 1.5
CDK9-201ENST00000373264 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.39■■□□□ 1.5
CDK9-201ENST00000373264 PRR5-ARHGAP8B1AHC4 643 aa24.39■■□□□ 1.5
CDK9-201ENST00000373264 MYCNP04198 464 aaPredicted RBP24.39■■□□□ 1.5
CDK9-201ENST00000373264 NFKB1P19838 968 aa24.39■■□□□ 1.5
CDK9-201ENST00000373264 BDNFP23560 247 aa24.39■■□□□ 1.5
CDK9-201ENST00000373264 PGFP49763 221 aa24.39■■□□□ 1.5
CDK9-201ENST00000373264 ARHGAP8P85298 464 aa24.39■■□□□ 1.5
CDK9-201ENST00000373264 MYLPFQ96A32 169 aa24.39■■□□□ 1.5
CDK9-201ENST00000373264 PNPOQ9NVS9 261 aa24.39■■□□□ 1.5
CDK9-201ENST00000373264 OR12D3Q9UGF7 316 aa24.39■■□□□ 1.5
CDK9-201ENST00000373264 UNCXA6NJT0 531 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 B2RBV5 119 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 KRT36O76013 467 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 POLBP06746 335 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 TYK2P29597 1187 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 CLNS1AP54105 237 aaKnown RBP24.39■■□□□ 1.49
CDK9-201ENST00000373264 IRF9Q00978 393 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 KRT72Q14CN4 511 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 RAB41Q5JT25 222 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 GNASQ5JWF2 1037 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 VWA5B1Q5TIE3 1220 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 MAVSQ7Z434 540 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 SPNS2Q8IVW8 549 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 DCLK2Q8N568 766 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 SCAMP5Q8TAC9 235 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 CHRAC1Q9NRG0 131 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 VANGL2Q9ULK5 521 aa24.39■■□□□ 1.49
CDK9-201ENST00000373264 LRIG2O94898 1065 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 HSP90AA5PQ58FG0 334 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 TRIM42Q8IWZ5 723 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 TEX9Q8N6V9 391 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 MCUR1Q96AQ8 359 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 CXorf56Q9H5V9 222 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 TRPM7Q96QT4 1865 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 BIRC5O15392 142 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 MGEA5O60502 916 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 SRGAP2BP0DMP2 458 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 PPP2R5DQ14738 602 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 WASHC2DQ5SRD0 308 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 OTOP3Q7RTS5 596 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 TAC4Q86UU9 113 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 RBM15BQ8NDT2 890 aaKnown RBP24.38■■□□□ 1.49
CDK9-201ENST00000373264 APBB2Q92870 758 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 ZNF419Q96HQ0 510 aaPredicted RBP24.38■■□□□ 1.49
CDK9-201ENST00000373264 WDCPQ9H6R7 721 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 SNX15Q9NRS6 342 aa24.38■■□□□ 1.49
CDK9-201ENST00000373264 THAP1Q9NVV9 213 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms