RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 RNF135Q8IUD6 432 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 MICALL2Q8IY33 904 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 APBB2Q92870 758 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 FAM167AQ96KS9 214 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 NIFKQ9BYG3 293 aaKnown RBP8.38□□□□□ -1.07
CD46-208ENST00000367042 DTLQ9NZJ0 730 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 PCDHGB4Q9UN71 923 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 FAF1Q9UNN5 650 aaPredicted RBP8.38□□□□□ -1.07
CD46-208ENST00000367042 PCDHGB5Q9Y5G0 923 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 COL4A5P29400 1685 aa8.38□□□□□ -1.07
CD46-208ENST00000367042 SF3B1O75533 1304 aaKnown RBP eCLIP8.38□□□□□ -1.072e-8■■■□□ 15.4
CD46-208ENST00000367042 TK2O00142 265 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 IL1BP01584 269 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 THRAP10827 490 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 CCDC130P13994 396 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 ZFXP17010 805 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 PTPRAP18433 802 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 CYP3A5P20815 502 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 PIK3R1P27986 724 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 RGS2P41220 211 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 RPL5P46777 297 aaKnown RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 SULT1E1P49888 294 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 THOP1P52888 689 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 SH3BGRP55822 239 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 RBP5P82980 135 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 FAM91A1Q658Y4 838 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 SEL1L3Q68CR1 1132 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 C16orf89Q6UX73 402 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 AMIGO2Q86SJ2 522 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 DSELQ8IZU8 1212 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 PCDH20Q8N6Y1 951 aaKnown RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 SNX31Q8N9S9 440 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 MCUQ8NE86 351 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 AGBL3Q8NEM8 1001 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 MAPK15Q8TD08 544 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 PPP1R13LQ8WUF5 828 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 DGCR14Q96DF8 476 aaKnown RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 CERS2Q96G23 380 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 CSPG4P5Q96PW8 444 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 SORT1Q99523 831 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 ZNF670Q9BS34 389 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 IARS2Q9NSE4 1012 aaKnown RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 BFARQ9NZS9 450 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 ATXN10Q9UBB4 475 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 GNEQ9Y223 722 aaKnown RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 A0A0A0MRY4 1105 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 SMIM31A0A1B0GVY4 71 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 MFSD11O43934 449 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 FAM189A1O60320 539 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 TRIM13O60858 407 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 SEC24DO94855 1032 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 PIGNO95427 931 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 LTFP02788 710 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 PABPC4LP0CB38 370 aaKnown RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 PGAM1P18669 254 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 ARRB2P32121 409 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 MAP7D1Q3KQU3 841 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 CYP2R1Q6VVX0 501 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 FBXO16Q8IX29 292 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 DRAXINQ8NBI3 349 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 LENG1Q96BZ8 264 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 MFSD3Q96ES6 412 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 P2RY11Q96G91 374 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 SPATA13Q96N96 652 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 KCTD15Q96SI1 283 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 NPAS2Q99743 824 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 CCT7Q99832 543 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 MRPL45Q9BRJ2 306 aaKnown RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 SIKE1Q9BRV8 207 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 CDH19Q9H159 772 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 NMRAL1Q9HBL8 299 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 EPS15L1Q9UBC2 864 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 BCAP29Q9UHQ4 241 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 PSMD13Q9UNM6 376 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 KIAA1217Q5T5P2 1943 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 SPDYE16A6NNV3 312 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 CRTAMO95727 393 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 C1QAP02745 245 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 HNRNPCP07910 306 aaKnown RBP eCLIP8.37□□□□□ -1.07
CD46-208ENST00000367042 GHRHRQ02643 423 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 POU5F1BQ06416 359 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 LSAMPQ13449 338 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 USP10Q14694 798 aaKnown RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 GJC2Q5T442 439 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 KLHDC10Q6PID8 442 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 METTL7BQ6UX53 244 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 NAPRTQ6XQN6 538 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 B3GNT6Q6ZMB0 384 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 CYP4V2Q6ZWL3 525 aaPredicted RBP8.37□□□□□ -1.07
CD46-208ENST00000367042 TTC30AQ86WT1 665 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 USP33Q8TEY7 942 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 OMDQ99983 421 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 BCO2Q9BYV7 579 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 VPS33BQ9H267 617 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 DNAJC28Q9NX36 388 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 SNX13Q9Y5W8 968 aa8.37□□□□□ -1.07
CD46-208ENST00000367042 ANKRD33BA6NCL7 494 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 TNFAIP8O95379 198 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 STAMBPO95630 424 aa8.36□□□□□ -1.07
CD46-208ENST00000367042 IQCF3P0C7M6 154 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms