RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 ACP6Q9NPH0 428 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SCUBE2Q9NQ36 999 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 GPRC5CQ9NQ84 441 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 VAV3Q9UKW4 847 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 KPNA4O00629 521 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 KIAA0355O15063 1070 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 MSI1O43347 362 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 NR3C2P08235 984 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 H2AFZP0C0S5 128 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 EPHB1P54762 984 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 MLLT10P55197 1068 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 NFE2Q16621 373 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 AARS2Q5JTZ9 985 aaKnown RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 H2AFVQ71UI9 128 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 GALNT7Q86SF2 657 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 TICAM1Q8IUC6 712 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SNX29P2Q8IUI4 249 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 KIAA2013Q8IYS2 634 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 ANGPTL6Q8NI99 470 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 VMP1Q96GC9 406 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 REEP2Q9BRK0 252 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 PDCD2LQ9BRP1 358 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 LXNQ9BS40 222 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 HAUS8Q9BT25 410 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 IMPG2Q9BZV3 1241 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 C10orf88Q9H8K7 445 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 IFT122Q9HBG6 1241 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 FLRT1Q9NZU1 646 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 DNM3Q9UQ16 869 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 RWDD3Q9Y3V2 267 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 A0A0A6YYK5 440 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 H3BMQ9 156 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SLITRK3O94933 977 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 CCDC159P0C7I6 412 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 ACTN1P12814 892 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 IVDP26440 423 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 GALCP54803 685 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 PHC1P78364 1004 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 GALNT2Q10471 571 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 HIC1Q14526 733 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 CLUL1Q15846 466 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 CARTPTQ16568 116 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SGO2Q562F6 1265 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 PERM1Q5SV97 790 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 CCBE1Q6UXH8 406 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 TMC5Q6UXY8 1006 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 OTOP3Q7RTS5 596 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SLFN12Q8IYM2 578 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SPARTQ8N0X7 666 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 BEND7Q8N7W2 519 aaPredicted RBP9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 KLHDC9Q8NEP7 349 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SLC35G2Q8TBE7 412 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SGCDQ92629 289 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 COG8Q96MW5 612 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 MXRA8Q9BRK3 442 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 PXMP2Q9NR77 195 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 ARMC1Q9NVT9 282 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 GMIPQ9P107 970 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 STK17AQ9UEE5 414 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 TAGLN3Q9UI15 199 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 B3GNT3Q9Y2A9 372 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 Q9Y3F1 56 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 TRAF6Q9Y4K3 522 aa9.54□□□□□ -0.88
SMARCAL1-202ENST00000358207 SNTNA6NMZ2 147 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 TRIM77I1YAP6 450 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 CLIC2O15247 247 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 DYNC1LI2O43237 492 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 CCNT2O60583 730 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 POLR2CP19387 275 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 HADHAP40939 763 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 KRT6CP48668 564 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 SMAD3P84022 425 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 COASYQ13057 564 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 INSCQ1MX18 579 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 ANKRD33Q7Z3H0 272 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 KBTBD6Q86V97 674 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 DCP2Q8IU60 420 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 TDHQ8IZJ6 230 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 LILRB2Q8N423 598 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 RDH13Q8NBN7 331 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 GALNT6Q8NCL4 622 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 ARRDC4Q8NCT1 418 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 GLMNQ92990 594 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 PAWRQ96IZ0 340 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 AIFM2Q9BRQ8 373 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 KIFC3Q9BVG8 833 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 NAA50Q9GZZ1 169 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 CLPBQ9H078 707 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 VPS45Q9NRW7 570 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 UCKL1Q9NWZ5 548 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 PPME1Q9Y570 386 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 ANGPTL3Q9Y5C1 460 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 ASTN1O14525 1302 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 CROCCQ5TZA2 2017 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 RALGAPA2Q2PPJ7 1873 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 DOCK5Q9H7D0 1870 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 TISP43B9A030 160 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 POC1B-GALNT4F8VUJ3 575 aa9.53□□□□□ -0.88
SMARCAL1-202ENST00000358207 GOLGA8MH3BSY2 632 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms