RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PIGZQ86VD9 579 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 CLVS1Q8IUQ0 354 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 SLC41A1Q8IVJ1 513 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 SHCBP1Q8NEM2 672 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 PCDH19Q8TAB3 1148 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 C18orf25Q96B23 403 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 TRIM15Q9C019 465 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 RAB6CQ9H0N0 254 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 MRPL40Q9NQ50 206 aaKnown RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 RBM22Q9NW64 420 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 TCEA3O75764 348 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 AMHP03971 560 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 S100BP04271 92 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 CHN2P52757 468 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 INPP5AQ14642 412 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 PLEKHG4Q58EX7 1191 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 TREML1Q86YW5 311 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 SLC4A11Q8NBS3 891 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 PGLYRP2Q96PD5 576 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 DHX33Q9H6R0 707 aaKnown RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 UBQLN1Q9UMX0 589 aaKnown RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 CRYL1Q9Y2S2 319 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 PARP4Q9UKK3 1724 aaKnown RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 NUP98P52948 1817 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 DDNO94850 711 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 C2P06681 752 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 ARF4P18085 180 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 VCLP18206 1134 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 CDC16Q13042 620 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF235Q14590 738 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 SETD3Q86TU7 594 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 CRYGNQ8WXF5 182 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 MIPEPQ99797 713 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 MMADHCQ9H3L0 296 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 S100A14Q9HCY8 104 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 GPRC5DQ9NZD1 345 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 PRKAG3Q9UGI9 489 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 PCDHA11Q9Y5I1 949 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 ORC6Q9Y5N6 252 aa12.69□□□□□ -0.38
SNRNP48-201ENST00000342415 CASTOR2A6NHX0 329 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 INPP4BO15327 924 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 GAS2O43903 313 aaKnown RBP12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 ENDOD1O94919 500 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 CYP2C8P10632 490 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 YBX3P16989 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 PGGT1BP53609 377 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 RTP1P59025 263 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 NEDD8Q15843 81 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 CGB2Q6NT52 195 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 ABI1Q8IZP0 508 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 DNERQ8NFT8 737 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 LRRC39Q96DD0 335 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 TRAPPC9Q96Q05 1148 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 ASB7Q9H672 318 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 TYROBPO43914 113 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 RECQL4O94761 1208 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 CD4P01730 458 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 NFKB1P19838 968 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 LIN52Q52LA3 116 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 ULBP1Q9BZM6 244 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 AP4B1Q9Y6B7 739 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 PFDN6O15212 129 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 ERCC2P18074 760 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 CYP2B6P20813 491 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 ATICP31939 592 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 ADCYAP1R1P41586 468 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 RPL14P50914 215 aaKnown RBP12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 CDH13P55290 713 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 TSPY1Q01534 308 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 WASHC5Q12768 1159 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 PRKAA1Q13131 559 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 FASTKQ14296 549 aaKnown RBP12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 TBCELQ5QJ74 424 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 C6orf52Q5T4I8 152 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 TMEM198Q66K66 360 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 SATL1Q86VE3 508 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 PAIP1Q9H074 479 aaKnown RBP12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 CHRAC1Q9NRG0 131 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 DSEQ9UL01 958 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 SNX5Q9Y5X3 404 aa12.68□□□□□ -0.38
SNRNP48-201ENST00000342415 C15orf38-AP3S2A0A0A6YYH1 394 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 ZNF839A8K0R7 811 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 FARP2O94887 1054 aaPredicted RBP12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 RALGDSQ12967 914 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 KLF10Q13118 480 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 MOGSQ13724 837 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 FBXO48Q5FWF7 155 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 GRTP1Q5TC63 336 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 ARPINQ7Z6K5 226 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 DNAJB3Q8WWF6 145 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 UTP4Q969X6 686 aaKnown RBP12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 PIWIL1Q96J94 861 aaKnown RBP12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 FBXL18Q96ME1 805 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 PHF12Q96QT6 1004 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 SYT11Q9BT88 431 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 SLC4A5Q9BY07 1137 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 NT5MQ9NPB1 228 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 NDFIP2Q9NV92 336 aa12.67□□□□□ -0.38
SNRNP48-201ENST00000342415 PKD2L2Q9NZM6 624 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms