RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 RAD54BQ9Y620 910 aa8.8□□□□□ -1
TDP1-201ENST00000335725 COL15A1P39059 1388 aa8.79□□□□□ -1
TDP1-201ENST00000335725 SETBP1Q9Y6X0 1596 aa8.79□□□□□ -1
TDP1-201ENST00000335725 NUP153P49790 1475 aaKnown RBP8.79□□□□□ -1
TDP1-201ENST00000335725 NDST3O95803 873 aa8.79□□□□□ -1
TDP1-201ENST00000335725 DLGAP3O95886 979 aa8.79□□□□□ -1
TDP1-201ENST00000335725 ABHD2P08910 425 aa8.79□□□□□ -1
TDP1-201ENST00000335725 DLDP09622 509 aaKnown RBP8.79□□□□□ -1
TDP1-201ENST00000335725 MAOBP27338 520 aa8.79□□□□□ -1
TDP1-201ENST00000335725 IL12AP29459 219 aa8.79□□□□□ -1
TDP1-201ENST00000335725 RPA3P35244 121 aaPredicted RBP8.79□□□□□ -1
TDP1-201ENST00000335725 MAPK12P53778 367 aa8.79□□□□□ -1
TDP1-201ENST00000335725 EIF3EP60228 445 aaKnown RBP8.79□□□□□ -1
TDP1-201ENST00000335725 XKRXQ6PP77 449 aa8.79□□□□□ -1
TDP1-201ENST00000335725 RHOUQ7L0Q8 258 aa8.79□□□□□ -1
TDP1-201ENST00000335725 ADCK1Q86TW2 530 aa8.79□□□□□ -1
TDP1-201ENST00000335725 SEPT12Q8IYM1 358 aa8.79□□□□□ -1
TDP1-201ENST00000335725 KLHL6Q8WZ60 621 aa8.79□□□□□ -1
TDP1-201ENST00000335725 AKAP1Q92667 903 aaKnown RBP eCLIP8.79□□□□□ -1
TDP1-201ENST00000335725 DLG3Q92796 817 aa8.79□□□□□ -1
TDP1-201ENST00000335725 C11orf24Q96F05 449 aaPredicted RBP8.79□□□□□ -1
TDP1-201ENST00000335725 OLAHQ9NV23 265 aa8.79□□□□□ -1
TDP1-201ENST00000335725 MALT1Q9UDY8 824 aa8.79□□□□□ -1
TDP1-201ENST00000335725 ADAMTS1Q9UHI8 967 aa8.79□□□□□ -1
TDP1-201ENST00000335725 CDH22Q9UJ99 828 aa8.79□□□□□ -1
TDP1-201ENST00000335725 PCDHGC3Q9UN70 934 aa8.79□□□□□ -1
TDP1-201ENST00000335725 KLF2Q9Y5W3 355 aaPredicted RBP8.79□□□□□ -1
TDP1-201ENST00000335725 ARHGAP23Q9P227 1491 aa8.79□□□□□ -1
TDP1-201ENST00000335725 A0A087X0T9 212 aa8.79□□□□□ -1
TDP1-201ENST00000335725 FAM170AA1A519 330 aa8.79□□□□□ -1
TDP1-201ENST00000335725 H3BMM5 538 aa8.79□□□□□ -1
TDP1-201ENST00000335725 MEN1O00255 615 aa8.79□□□□□ -1
TDP1-201ENST00000335725 PRKCBP05771 671 aa8.79□□□□□ -1
TDP1-201ENST00000335725 UGT2B4P06133 528 aa8.79□□□□□ -1
TDP1-201ENST00000335725 PSKH1P11801 424 aa8.79□□□□□ -1
TDP1-201ENST00000335725 IL13P35225 146 aa8.79□□□□□ -1
TDP1-201ENST00000335725 TRAPPC10P48553 1259 aa8.79□□□□□ -1
TDP1-201ENST00000335725 LGALS3BPQ08380 585 aa8.79□□□□□ -1
TDP1-201ENST00000335725 RAB39AQ14964 217 aa8.79□□□□□ -1
TDP1-201ENST00000335725 AGAP6Q5VW22 663 aa8.79□□□□□ -1
TDP1-201ENST00000335725 TTC33Q6PID6 262 aaPredicted RBP8.79□□□□□ -1
TDP1-201ENST00000335725 RIOX2Q8IUF8 465 aa8.79□□□□□ -1
TDP1-201ENST00000335725 CCDC60Q8IWA6 550 aaPredicted RBP8.79□□□□□ -1
TDP1-201ENST00000335725 CTAGE3PQ8IX95 158 aa8.79□□□□□ -1
TDP1-201ENST00000335725 TRIM22Q8IYM9 498 aa8.79□□□□□ -1
TDP1-201ENST00000335725 FBXW8Q8N3Y1 598 aa8.79□□□□□ -1
TDP1-201ENST00000335725 FIBCD1Q8N539 461 aa8.79□□□□□ -1
TDP1-201ENST00000335725 ALKBH8Q96BT7 664 aaKnown RBP8.79□□□□□ -1
TDP1-201ENST00000335725 EAF2Q96CJ1 260 aaPredicted RBP8.79□□□□□ -1
TDP1-201ENST00000335725 AGAP4Q96P64 663 aa8.79□□□□□ -1
TDP1-201ENST00000335725 PLIN2Q99541 437 aa8.79□□□□□ -1
TDP1-201ENST00000335725 VRTNQ9H8Y1 702 aa8.79□□□□□ -1
TDP1-201ENST00000335725 AKIP1Q9NQ31 210 aa8.79□□□□□ -1
TDP1-201ENST00000335725 EHD3Q9NZN3 535 aa8.79□□□□□ -1
TDP1-201ENST00000335725 PRR12Q9ULL5 1215 aa8.79□□□□□ -1
TDP1-201ENST00000335725 MN1Q10571 1320 aaPredicted RBP8.79□□□□□ -1
TDP1-201ENST00000335725 CD163L1Q9NR16 1453 aa8.79□□□□□ -1
TDP1-201ENST00000335725 HMX3A6NHT5 357 aa8.79□□□□□ -1
TDP1-201ENST00000335725 SORBS3O60504 671 aa8.79□□□□□ -1
TDP1-201ENST00000335725 PLA2G6O60733 806 aa8.79□□□□□ -1
TDP1-201ENST00000335725 HPGDP15428 266 aa8.79□□□□□ -1
TDP1-201ENST00000335725 PMS1P54277 932 aaKnown RBP8.79□□□□□ -1
TDP1-201ENST00000335725 CDKL1Q00532 357 aa8.79□□□□□ -1
TDP1-201ENST00000335725 CTBSQ01459 385 aa8.79□□□□□ -1
TDP1-201ENST00000335725 NME3Q13232 169 aa8.79□□□□□ -1
TDP1-201ENST00000335725 GALEQ14376 348 aa8.79□□□□□ -1
TDP1-201ENST00000335725 ZNF792Q3KQV3 632 aa8.79□□□□□ -1
TDP1-201ENST00000335725 PLEKHG6Q3KR16 790 aa8.79□□□□□ -1
TDP1-201ENST00000335725 FUT11Q495W5 492 aa8.79□□□□□ -1
TDP1-201ENST00000335725 ATAD3CQ5T2N8 411 aa8.79□□□□□ -1
TDP1-201ENST00000335725 UBAP2Q5T6F2 1119 aaKnown RBP8.79□□□□□ -1
TDP1-201ENST00000335725 TMPRSS9Q7Z410 1059 aa8.79□□□□□ -1
TDP1-201ENST00000335725 WDR49Q8IV35 697 aa8.79□□□□□ -1
TDP1-201ENST00000335725 PARP8Q8N3A8 854 aa8.79□□□□□ -1
TDP1-201ENST00000335725 ZNF680Q8NEM1 530 aa8.79□□□□□ -1
TDP1-201ENST00000335725 SEPT8Q92599 483 aa8.79□□□□□ -1
TDP1-201ENST00000335725 NKD2Q969F2 451 aaPredicted RBP8.79□□□□□ -1
TDP1-201ENST00000335725 STN1Q9H668 368 aaKnown RBP8.79□□□□□ -1
TDP1-201ENST00000335725 B3GNT2Q9NY97 397 aa8.79□□□□□ -1
TDP1-201ENST00000335725 TRPM5Q9NZQ8 1165 aa8.79□□□□□ -1
TDP1-201ENST00000335725 EIF3KQ9UBQ5 218 aaKnown RBP8.79□□□□□ -1
TDP1-201ENST00000335725 PRELID3BQ9Y3B1 194 aa8.79□□□□□ -1
TDP1-201ENST00000335725 DISP2A7MBM2 1401 aa8.79□□□□□ -1
TDP1-201ENST00000335725 ZNF609O15014 1411 aa8.79□□□□□ -1
TDP1-201ENST00000335725 FRMPD1Q5SYB0 1578 aa8.79□□□□□ -1
TDP1-201ENST00000335725 EXOC1LA0A1B0GW35 172 aa8.78□□□□□ -1
TDP1-201ENST00000335725 GSTTP1A0A1W2PQM5 241 aa8.78□□□□□ -1
TDP1-201ENST00000335725 SAGE2PA6NJ88 616 aa8.78□□□□□ -1
TDP1-201ENST00000335725 ZBTB5O15062 677 aa8.78□□□□□ -1
TDP1-201ENST00000335725 PSIP1O75475 530 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 ALDH1A2O94788 518 aa8.78□□□□□ -1
TDP1-201ENST00000335725 POP4O95707 220 aaKnown RBP8.78□□□□□ -1
TDP1-201ENST00000335725 PTTG1O95997 202 aa8.78□□□□□ -1
TDP1-201ENST00000335725 ERBB2P04626 1255 aa8.78□□□□□ -1
TDP1-201ENST00000335725 ABCB4P21439 1286 aa8.78□□□□□ -1
TDP1-201ENST00000335725 CCND2P30279 289 aa8.78□□□□□ -1
TDP1-201ENST00000335725 HOXA1P49639 335 aaPredicted RBP8.78□□□□□ -1
TDP1-201ENST00000335725 CLCNKBP51801 687 aa8.78□□□□□ -1
TDP1-201ENST00000335725 DBPQ10586 325 aaPredicted RBP8.78□□□□□ -1
TDP1-201ENST00000335725 ELOAQ14241 798 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms