RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 HEMGNQ9BXL5 484 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 AP1M1Q9BXS5 423 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 AGXT2Q9BYV1 514 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ROGDIQ9GZN7 287 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SLITRK2Q9H156 845 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MYLK2Q9H1R3 596 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TDRKHQ9Y2W6 561 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ROBO3Q96MS0 1386 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 A0A087X1B8 175 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 GRM6O15303 877 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PDE9AO76083 593 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 HIST1H2ABP04908 130 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ENO2P09104 434 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 IRF1P10914 325 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TSHRP16473 764 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 RPL21P46778 160 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MRPS25P82663 173 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 FNDC3BQ53EP0 1204 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ZC3H14Q6PJT7 736 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ILDR2Q71H61 639 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 HIST3H2AQ7L7L0 130 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PHYKPLQ8IUZ5 450 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 HDDC3Q8N4P3 179 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TTLQ8NG68 377 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CXorf40AQ8TE69 158 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 HIST1H2ACQ93077 130 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF670Q9BS34 389 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 RAB11FIP5Q9BXF6 653 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 FAM192AQ9GZU8 254 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PDE11AQ9HCR9 933 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ZC4H2Q9NQZ6 224 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 DEC1Q9P2X7 70 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 FAM153AQ9UHL3 310 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 AP4S1Q9Y587 144 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 GNG14A0A1W2PPG7 69 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MEI4A8MW99 385 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 RECQL5O94762 991 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CD63P08962 238 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CCND1P24385 295 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SCNN1AP37088 669 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ATN1P54259 1190 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 EFEMP1Q12805 493 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MPPE1Q53F39 396 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SHC4Q6S5L8 630 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 RABEPKQ7Z6M1 372 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 RBFAQ8N0V3 343 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 AGGF1Q8N302 714 aaeCLIP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CARNMT1Q8N4J0 409 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 WNT8BQ93098 351 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MAGED4Q96JG8 741 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 BTN2A3PQ96KV6 586 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 NECTIN4Q96NY8 510 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CPNE1Q99829 537 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MLPHQ9BV36 600 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ISCUQ9H1K1 167 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 EXD2Q9NVH0 621 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SAGE1Q9NXZ1 904 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 STMN3Q9NZ72 180 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF112Q9UJU3 913 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PADI4Q9UM07 663 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SCAF8Q9UPN6 1271 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PCDHB1Q9Y5F3 818 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PCDHGA2Q9Y5H1 932 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CEP290O15078 2479 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CENPXA8MT69 81 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SUPT3HB4E1H0 165 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CLDN4O14493 209 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TRIM49P0CI25 452 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TRIM49CP0CI26 452 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 HLA-DPA1P20036 260 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MMP13P45452 471 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SCNN1GP51170 649 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 RIPPLY1Q0D2K3 151 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PTK7Q13308 1070 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 BIKQ13323 160 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 TUSC3Q13454 348 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 KPNB1Q14974 876 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ZKSCAN8Q15776 578 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CRY1Q16526 586 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PTPN21Q16825 1174 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 LSM12Q3MHD2 195 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 HABP4Q5JVS0 413 aaKnown RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 KLHDC7AQ5VTJ3 777 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 DAB2IPQ5VWQ8 1189 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 GLT6D1Q7Z4J2 308 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 DNAJB3Q8WWF6 145 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF669Q96BR6 464 aaPredicted RBP3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MAML3Q96JK9 1138 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 C12orf42Q96LP6 360 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 OSGEPL1Q9H4B0 414 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 FAM49BQ9NUQ9 324 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SH3BP4Q9P0V3 963 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MORF4L1Q9UBU8 362 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 MYO7AQ13402 2215 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 FAM234BA2RU67 622 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 CBX4O00257 560 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 PMPCBO75439 489 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 RECQL4O94761 1208 aa3.25□□□□□ -1.89
CLOCK-201ENST00000309964 SUPT7LO94864 414 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms