RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 AGAP3Q96P47 875 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 CNPY3Q9BT09 278 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 ILKAPQ9H0C8 392 aaPredicted RBP10.5□□□□□ -0.73
LMX1A-201ENST00000294816 ARMC7Q9H6L4 198 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 JPH1Q9HDC5 661 aaPredicted RBP10.5□□□□□ -0.73
LMX1A-201ENST00000294816 SNX15Q9NRS6 342 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 HMGXB4Q9UGU5 601 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 CCDC78A2IDD5 438 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 TMX2-CTNND1H3BSU7 103 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 VAPBO95292 243 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 LTFP02788 710 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 NR3C2P08235 984 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 GLRBP48167 497 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 HARS2P49590 506 aaKnown RBP10.5□□□□□ -0.73
LMX1A-201ENST00000294816 IRF9Q00978 393 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 PIGGQ5H8A4 983 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF667Q5HYK9 610 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 SEL1L3Q68CR1 1132 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 TIFABQ6ZNK6 161 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 CROCCP3Q8IVE0 287 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 BRSK2Q8IWQ3 736 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 DCLK2Q8N568 766 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 ACMSDQ8TDX5 336 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 YIPF2Q9BWQ6 316 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 GOLGB1Q14789 3259 aaKnown RBP10.5□□□□□ -0.73
LMX1A-201ENST00000294816 PLOD2O00469 737 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 MCF2P10911 925 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 DPP6P42658 865 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 CD97P48960 835 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF143P52747 638 aaPredicted RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 PGGT1BP53609 377 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 BORAQ6PGQ7 559 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 KCNT2Q6UVM3 1135 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 WDR49Q8IV35 697 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 MCUQ8NE86 351 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 NGLY1Q96IV0 654 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 TWNKQ96RR1 684 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 MAGEB5Q9BZ81 275 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 UNKQ9C0B0 810 aaKnown RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 EFCAB1Q9HAE3 211 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 PCDH18Q9HCL0 1135 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 TUBGCP4Q9UGJ1 667 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 AP4S1Q9Y587 144 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 SAC3D1A6NKF1 404 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 KPNA7A9QM74 516 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 PIGNO95427 931 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 OCM2P0CE71 109 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 OCMP0CE72 109 aaPredicted RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 CKMT2P17540 419 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 TFE3P19532 575 aaPredicted RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 CYP2F1P24903 491 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 CCND2P30279 289 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 CDH5P33151 784 aaPredicted RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 RALGDSQ12967 914 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 XKR5Q6UX68 686 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 SLC4A11Q8NBS3 891 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 SNRNP25Q9BV90 132 aaKnown RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 GATA5Q9BWX5 397 aaPredicted RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 TMEM39BQ9GZU3 492 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 BARX2Q9UMQ3 279 aaPredicted RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 CDC14AQ9UNH5 594 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 CROCCQ5TZA2 2017 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 PSMD12O00232 456 aaPredicted RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 TRIM13O60858 407 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 OATP04181 439 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 PTGER2P43116 358 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 ASPAP45381 313 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 PTPN11Q06124 597 aaPredicted RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 ENPEPQ07075 957 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 XKR3Q5GH77 459 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 OGFOD2Q6N063 350 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 Q6ZNX1 250 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 TICAM1Q8IUC6 712 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 CHERPQ8IWX8 916 aaKnown RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 CCNYL1Q8N7R7 359 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 RP9Q8TA86 221 aaKnown RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 ABHD8Q96I13 439 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 NOL11Q9H8H0 719 aaKnown RBP10.49□□□□□ -0.73
LMX1A-201ENST00000294816 MOCS1Q9NZB8 636 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 HES2Q9Y543 173 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 SIPA1L1O43166 1804 aa10.49□□□□□ -0.73
LMX1A-201ENST00000294816 A0A096LPK6 155 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 PRSS51A0A1B0GVH4 220 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TPST1O60507 370 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 PRKCGP05129 697 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 ZFXP17010 805 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TGM2P21980 687 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 OLIG2Q13516 323 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 IKBKEQ14164 716 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TRNP1Q6NT89 227 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 TTC33Q6PID6 262 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 GK5Q6ZS86 529 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 ZBTB49Q6ZSB9 765 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 FAM183BPQ6ZVS7 135 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 STRA8Q7Z7C7 330 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 PGAM4Q8N0Y7 254 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 SNX31Q8N9S9 440 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 DLG3Q92796 817 aa10.48□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF669Q96BR6 464 aaPredicted RBP10.48□□□□□ -0.73
LMX1A-201ENST00000294816 C12orf43Q96C57 262 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms