RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 OSCP1Q8WVF1 389 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 TOE1Q96GM8 510 aaKnown RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 GTPBP2Q9BX10 602 aaKnown RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 G6PC2Q9NQR9 355 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 COMMD8Q9NX08 183 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 SUCLA2Q9P2R7 463 aaPredicted RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 ITGA11Q9UKX5 1188 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 PCDHB2Q9Y5E7 798 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 SLIT3O75094 1523 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 RGPD3A6NKT7 1758 aaPredicted RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 RGPD4Q7Z3J3 1758 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 RAD51DO75771 328 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 LARGE1O95461 756 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 NTSR2O95665 410 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 LRPAP1P30533 357 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 NKX6-1P78426 367 aaPredicted RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 NFIXQ14938 502 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 GKAP1Q5VSY0 366 aaPredicted RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 PMF1Q6P1K2 205 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 ISLR2Q6UXK2 745 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 NUP54Q7Z3B4 507 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 IQCHQ86VS3 1027 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 TRMT2AQ8IZ69 625 aaKnown RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 ZNF619Q8N2I2 560 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 BBOF1Q8ND07 529 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 BSCL2Q96G97 398 aaPredicted RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 NEK1Q96PY6 1258 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 TMEM237Q96Q45 408 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 PLIN2Q99541 437 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 TCHPQ9BT92 498 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 H2AFJQ9BTM1 129 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 NPLQ9BXD5 320 aaPredicted RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 AGXT2Q9BYV1 514 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 SCOCQ9UIL1 159 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 PMF1-BGLAPU3KQ54 211 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 ZNF839A8K0R7 811 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 IKBKBO14920 756 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 PEX11AO75192 247 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 THBS1P07996 1170 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 PDHBP11177 359 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 HGFP14210 728 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 BTF3P20290 206 aaKnown RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 FPR1P21462 350 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 GNAQP50148 359 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 CDR1P51861 262 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 CLRN1P58418 232 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 RPA4Q13156 261 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 KCNC3Q14003 757 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 SYCP1Q15431 976 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 LRRC23Q53EV4 343 aaPredicted RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 ZNF484Q5JVG2 852 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 RARS2Q5T160 578 aaKnown RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 FAM160B1Q5W0V3 765 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 CREB3L3Q68CJ9 461 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 OTUD7BQ6GQQ9 843 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 ETV3LQ6ZN32 361 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 ARHGEF18Q6ZSZ5 1173 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 C8orf86Q6ZUL3 223 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 OTUD6AQ7L8S5 288 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 WDTC1Q8N5D0 677 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 OR2I1PQ8NGU4 316 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 BPIFB1Q8TDL5 484 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 UBLCP1Q8WVY7 318 aaPredicted RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 MRGPRX1Q96LB2 322 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 C5orf34Q96MH7 638 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 HS6ST2Q96MM7 605 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 REEP2Q9BRK0 252 aa2.87□□□□□ -1.95
CHD1-201ENST00000284049 CHMP1AQ9HD42 196 aaPredicted RBP2.87□□□□□ -1.95
CHD1-201ENST00000284049 TMEM94Q12767 1356 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 PLCH1Q4KWH8 1693 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 A0A1W2PRX2 142 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 NPIPB15A6NHN6 443 aaPredicted RBP2.86□□□□□ -1.95
CHD1-201ENST00000284049 LRRC72A6NJI9 287 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 UBXN8O00124 270 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 SLC33A1O00400 549 aaPredicted RBP2.86□□□□□ -1.95
CHD1-201ENST00000284049 NFATC1O95644 943 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 PENKP01210 267 aaPredicted RBP2.86□□□□□ -1.95
CHD1-201ENST00000284049 VIMP08670 466 aaKnown RBP2.86□□□□□ -1.95
CHD1-201ENST00000284049 TPM1P09493 284 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 RPS2P15880 293 aaKnown RBP2.86□□□□□ -1.95
CHD1-201ENST00000284049 RBL1P28749 1068 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 MSANTD1Q6ZTZ1 278 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 TXNRD3Q86VQ6 643 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 AMIGO3Q86WK7 504 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 CDAN1Q8IWY9 1227 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 LINS1Q8NG48 757 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 MFSD14AQ96MC6 490 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 SMOQ99835 787 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 TPPP3Q9BW30 176 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 BTBD2Q9BX70 525 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 STN1Q9H668 368 aaKnown RBP2.86□□□□□ -1.95
CHD1-201ENST00000284049 SYNPO2LQ9H987 977 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 SELENONQ9NZV5 590 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 CGNQ9P2M7 1197 aaKnown RBP2.86□□□□□ -1.95
CHD1-201ENST00000284049 CTNNAL1Q9UBT7 734 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 HPCAL4Q9UM19 191 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 STRAPQ9Y3F4 350 aaKnown RBP2.86□□□□□ -1.95
CHD1-201ENST00000284049 CDY1Q9Y6F8 540 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 ATP7BP35670 1465 aa2.86□□□□□ -1.95
CHD1-201ENST00000284049 ATP8B3O60423 1300 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms