RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 FEZF2Q8TBJ5 459 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 FAM49BQ9NUQ9 324 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 ARHGEF40Q8TER5 1519 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 H7C2Y5 167 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 BTG3Q14201 252 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 ZFP1Q6P2D0 407 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 CARNMT1Q8N4J0 409 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 AP3S1Q92572 193 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 APOL2Q9BQE5 337 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 BDH2Q9BUT1 245 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 C2orf49Q9BVC5 232 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 C6orf62Q9GZU0 229 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 VTA1Q9NP79 307 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 CORO2BQ9UQ03 480 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 BCLAF3A2AJT9 711 aaKnown RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 SETMARQ53H47 684 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 PAGE2Q7Z2X7 111 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 ACSF2Q96CM8 615 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-201ENST00000270722 TRIM9Q9C026 710 aa13.51□□□□□ -0.25
PRDM16-201ENST00000270722 POLRMTO00411 1230 aaKnown RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 GDI2P50395 445 aaKnown RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 SLC9A4Q6AI14 798 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 COMMD8Q9NX08 183 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 APC2O95996 2303 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 NDUFB10O96000 172 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 PTPN6P29350 595 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 NTSP30990 170 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 ADAM17P78536 824 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 C12orf60Q5U649 245 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 FAM46CQ5VWP2 391 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 GPAT2Q6NUI2 795 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 USP45Q70EL2 814 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 PROX1Q92786 737 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 FGF19O95750 216 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 HOXC12P31275 282 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 PPM1LQ5SGD2 360 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 DEFB129Q9H1M3 183 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 KLHL1Q9NR64 748 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 CYTH4Q9UIA0 394 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 FEN1P39748 380 aaKnown RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 DDR2Q16832 855 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 SWI5Q1ZZU3 235 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 EIF3MQ7L2H7 374 aaKnown RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 ABI3Q9P2A4 366 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 VSTM5A8MXK1 200 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 O00370 1275 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 WEE2P0C1S8 567 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 SMIM11AP58511 58 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 TOMM20Q15388 145 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 DUS1LQ6P1R4 473 aaKnown RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 PNPLA8Q9NP80 782 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 CRNNQ9UBG3 495 aaPredicted RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 AIM2O14862 343 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 SSNA1O43805 119 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 SUPT7LO94864 414 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 HLA-DRAP01903 254 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 SCTRP47872 440 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 NR2C2P49116 596 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 CRELD2Q6UXH1 353 aaPredicted RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 TRMT11Q7Z4G4 463 aaKnown RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 CCDC28AQ8IWP9 274 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 ADGRF2Q8IZF7 708 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 BEND7Q8N7W2 519 aaPredicted RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 PRMT1Q99873 361 aaKnown RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 FAIM2Q9BWQ8 316 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 MFHAS1Q9Y4C4 1052 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 TNPO3Q9Y5L0 923 aaKnown RBP13.5□□□□□ -0.25
PRDM16-201ENST00000270722 QPRTQ15274 297 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 TFDP3Q5H9I0 405 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 B3GALNT2Q8NCR0 500 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 BBS1Q8NFJ9 593 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 BCL2L14Q9BZR8 327 aa13.5□□□□□ -0.25
PRDM16-201ENST00000270722 A0A087WXM4 84 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 SLC2A4P14672 509 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 ACTR3P61158 418 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 RBM12BQ8IXT5 1001 aaKnown RBP13.49□□□□□ -0.25
PRDM16-201ENST00000270722 DNERQ8NFT8 737 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 NSL1Q96IY1 281 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 ANTXR1Q9H6X2 564 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 DBR1Q9UK59 544 aaKnown RBP13.49□□□□□ -0.25
PRDM16-201ENST00000270722 ITGA11Q9UKX5 1188 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 PCDHB5Q9Y5E4 795 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 PRKAR1AP10644 381 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 ACO1P21399 889 aaKnown RBP13.49□□□□□ -0.25
PRDM16-201ENST00000270722 NPTX2P47972 431 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 ARSHQ5FYA8 562 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 TBCBQ99426 244 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 ELOVL4Q9GZR5 314 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 GIN1Q9NXP7 522 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 ZNF70Q9UC06 446 aaPredicted RBP13.49□□□□□ -0.25
PRDM16-201ENST00000270722 EDARQ9UNE0 448 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 MAP3K4Q9Y6R4 1608 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 ANKRD65E5RJM6 399 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 TCF4P15884 667 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 STOMP27105 288 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 RPA1P27694 616 aa13.49□□□□□ -0.25
PRDM16-201ENST00000270722 NECTIN1Q15223 517 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms