RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ring1O35730 406 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 PargO88622 969 aaKnown RBP21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Gnat1P20612 350 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Adamts8P57110 905 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Fmo3P97501 534 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Dpy19l3Q71B07 716 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Casd1Q7TN73 797 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Dnajb13Q80Y75 316 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Asb14Q8C6Y6 587 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Atpaf2Q91YY4 289 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Eef1akmt2Q9D853 244 aa21.77■■□□□ 1.08
Ccdc88a-202ENSMUST00000109477 Gm16430A6X8J1 155 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Gm6588E9Q3K0 461 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Htr2cP34968 459 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Lsmem1Q3UQS2 128 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Gm29609Q3UU56 907 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Lrrc47Q505F5 581 aaKnown RBP21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Atp11bQ6DFW5 1175 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 PdgfrlQ6PE55 375 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Got1l1Q7TSV6 404 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Gtf3c2Q8BL74 907 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Atg14Q8CDJ3 492 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Acad9Q8JZN5 625 aaKnown RBP21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 ClmpQ8R373 373 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Slxl1Q9D515 155 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Plod1Q9R0E2 728 aa21.76■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Vmn2r115E9Q0E7 857 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Vmn1r39G3UWE6 305 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 BC024978J3QPC3 361 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Gm14496K7N5U4 849 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Il27raO70394 623 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Lhx3P50481 400 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 TubP50586 505 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Pms2P54279 859 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Znf112Q0VAW7 879 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Rnf40Q3U319 1001 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 StilQ60988 1262 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Olfr20Q7TRX9 314 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Trit1Q80UN9 467 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 NonoQ99K48 473 aaKnown RBP21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ccdc124Q9D8X2 217 aaKnown RBP21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Slc40a1Q9JHI9 570 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 MefvQ9JJ26 767 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Snx1Q9WV80 522 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Umodl1Q5DID3 1319 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Zbtb11G5E8B9 1050 aaKnown RBP21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Sept7O55131 436 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Psmc3O88685 442 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Hsd17b7O88736 334 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Psma2P49722 234 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Pecam1Q08481 727 aaKnown RBP21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Shc2Q8BMC3 573 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Mpp7Q8BVD5 576 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Fndc3aQ8BX90 1198 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Mta1Q8K4B0 715 aaKnown RBP21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Uhrf1Q8VDF2 782 aaKnown RBP21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Hsf2bpQ9D4G2 338 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Pld1Q9Z280 1074 aa21.75■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Nup210Q9QY81 1886 aaKnown RBP21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Vmn2r88L7N1W8 857 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Zfpm1O35615 995 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Capn6O35646 641 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ncf2O70145 525 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 LdhcP00342 332 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 PorP37040 678 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Kcnn2P58390 839 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Arl4cP61208 192 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Smpdl3aP70158 445 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Eif4ebp2P70445 120 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Sox13Q04891 613 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Tmprss11aQ3UQ41 389 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Arnt2Q61324 712 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Cdkn3Q810P3 211 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ofcc1Q8BGX4 166 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 4933402J07RikQ8BHX0 270 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Gramd4Q8CB44 633 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Hectd2Q8CDU6 774 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Trim61Q8JZK6 461 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Sh2d5Q8JZW5 429 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Vmn1r213Q8R278 384 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Pcdhb11Q91UZ8 797 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Vangl2Q91ZD4 521 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Cpt1bQ924X2 772 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Arl2Q9D0J4 184 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Nmnat1Q9EPA7 285 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Adam17Q9Z0F8 827 aa21.74■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Man1b1A2AJ15 658 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Usp51B1AY15 661 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Lrrc6O88978 473 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Gad2P48320 585 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 CblbQ3TTA7 982 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ehbp1Q69ZW3 1231 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Abcg2Q7TMS5 657 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Rassf2Q8BMS9 326 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Tusc3Q8BTV1 347 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Kremen2Q8K1S7 461 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Ier5lQ99J55 406 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Rgs19Q9CX84 216 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 AuhQ9JLZ3 314 aa21.73■■□□□ 1.07
Ccdc88a-202ENSMUST00000109477 Gm12695A2AGB2 545 aa21.72■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms