RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Rmdn1Q9DCV4 305 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Mettl7bQ9DD20 244 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Rbck1Q9WUB0 508 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ccdc8D3YZV8 685 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Adam19O35674 920 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Dmp1O55188 503 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Cdk7Q03147 346 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ikzf1Q03267 517 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Rtl9Q32KG4 1339 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Btg1-ps1Q3V0S2 161 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Btg1-ps2Q3V0X0 161 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Rap1gap2Q5SVL6 712 aaKnown RBP19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Armcx2Q6A058 784 aaKnown RBP19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fam49aQ8BHZ0 323 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Msi2Q920Q6 346 aaKnown RBP19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Pard3bQ9CSB4 1203 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Nde1Q9CZA6 344 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Plin3Q9DBG5 437 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 LipaQ9Z0M5 397 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Cyp2c69E9PXC3 491 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Olfr1354E9Q5G9 310 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ebf3O08791 596 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Krt10P02535 570 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Alas2P08680 587 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Vps4bP46467 444 aaKnown RBP19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Cyp2c40P56657 491 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tubgcp3P58854 905 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Kir3dl1P83555 432 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 RalgdsQ03385 852 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tmem26Q3UP23 366 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fbxo41Q6NS60 873 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Chst10Q6PGK7 356 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Usp6nlQ80XC3 819 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Eif4bQ8BGD9 611 aaKnown RBP19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Clip4Q8CI96 704 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Q8R1Y2 203 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tcaf2Q921K8 919 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Polr3eQ9CZT4 710 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Rsph3bQ9DA80 389 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Usp21Q9QZL6 566 aa19.16■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Trim5E9PV98 497 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 EsrraO08580 422 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 AvilO88398 819 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Mettl17Q3U2U7 461 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 1810049J17RikQ3V2G9 153 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 DgkqQ6P5E8 934 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Dnajb13Q80Y75 316 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Lrrc24Q8BHA1 521 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Cdkn2aipQ8BI72 563 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tmem260Q8BMD6 703 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Stx16Q8BVI5 326 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Irak3Q8K4B2 609 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 NeproQ8R2U2 564 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fbxw7Q8VBV4 629 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Slc25a3Q8VEM8 357 aaKnown RBP19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Agap3Q8VHH5 910 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Stk33Q924X7 491 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Arhgap8Q9CXP4 425 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Serbp1Q9CY58 407 aaKnown RBP19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Nme7Q9QXL8 395 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ern2Q9Z2E3 911 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Plxna1P70206 1894 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Map7d3A2AEY4 876 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 DcxO88809 366 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ap2a1P17426 977 aaKnown RBP19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fbp2P70695 339 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Gabpb1Q00420 383 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Plcl1Q3USB7 1096 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Pcnx4Q3UVY5 1174 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Adgre1Q61549 931 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Znf148Q61624 794 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Lag3Q61790 521 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Zbtb41Q811F1 908 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 PigwQ8C398 503 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Podxl2Q8CAE9 603 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Sgsm3Q8VCZ6 750 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Vangl2Q91ZD4 521 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ecrg4Q99LS0 148 aa19.15■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Gm281D3Z1Y0 860 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 E230025N22RikG5E8S3 482 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Mmp3P28862 477 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Rpl5P47962 297 aaKnown RBP19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ndst1Q3UHN9 882 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Zfp956Q3UZY6 572 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tmem237Q3V0J1 427 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Foxd4Q60688 444 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 PapolaQ61183 739 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fra10ac1Q8BP78 315 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Syne4Q8CII8 388 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Micu3Q9CTY5 523 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Efhc1Q9D9T8 648 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Cul3Q9JLV5 768 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 S1pr4Q9Z0L1 386 aa19.14■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 ZxdbA2CE44 873 aa19.14■□□□□ 0.65
Shkbp1-201ENSMUST00000003857 Olfr652B9EHE6 318 aa19.14■□□□□ 0.65
Shkbp1-201ENSMUST00000003857 PenkP22005 268 aa19.14■□□□□ 0.65
Shkbp1-201ENSMUST00000003857 Prim2P33610 505 aa19.14■□□□□ 0.65
Shkbp1-201ENSMUST00000003857 Atp9bP98195 1146 aa19.14■□□□□ 0.65
Shkbp1-201ENSMUST00000003857 Znf235Q61116 645 aa19.14■□□□□ 0.65
Shkbp1-201ENSMUST00000003857 Olfr1105Q7TR58 312 aa19.14■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms