RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ZFXP17010 805 aaPredicted RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 CCR1P32246 355 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 NR2C2P49116 596 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 TUBP50607 506 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 SESN2P58004 480 aaPredicted RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 DMTNQ08495 405 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 ZBTB17Q13105 803 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 TSNAXIP1Q2TAA8 658 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 KDM7AQ6ZMT4 941 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 PCGF5Q86SE9 256 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 MON1AQ86VX9 555 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 CDKL3Q8IVW4 592 aaPredicted RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 VPS52Q8N1B4 723 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 DNAJC5GQ8N7S2 189 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 ANKRD42Q8N9B4 389 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 TLCD1Q96CP7 247 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 PGAP3Q96FM1 320 aaPredicted RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 TOX2Q96NM4 488 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 QKIQ96PU8 341 aaKnown RBP eCLIP8.02□□□□□ -1.13
NEK3-207ENST00000617054 C12orf65Q9H3J6 166 aaKnown RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 C11orf49Q9H6J7 331 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 ZMYND8Q9ULU4 1186 aaPredicted RBP8.02□□□□□ -1.13
NEK3-207ENST00000617054 MICAL3Q7RTP6 2002 aa8.02□□□□□ -1.13
NEK3-207ENST00000617054 MYO16Q9Y6X6 1858 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 A0A1W2PPM1 405 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 TTC24A2A3L6 582 aaPredicted RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 TBC1D4O60343 1298 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 CNTN5O94779 1100 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 IGLV3-25P01717 112 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 CHN1P15882 459 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 MDH1P40925 334 aaKnown RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 KCNQ1P51787 676 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 FOXK1P85037 733 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 EIF4EBP2Q13542 120 aaPredicted RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 MPP2Q14168 576 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 USP41Q3LFD5 358 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 PIK3R6Q5UE93 754 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 CNKSR3Q6P9H4 555 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 VSTM1Q6UX27 236 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 MICALCLQ6ZW33 695 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 SPRED2Q7Z698 418 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 CFAP52Q8N1V2 620 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 NTAN1Q96AB6 310 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 ZNF419Q96HQ0 510 aaPredicted RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 SLC9A7Q96T83 725 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 MRPL9Q9BYD2 267 aaKnown RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 KLC2Q9H0B6 622 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 CYP4F11Q9HBI6 524 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 PNPLA8Q9NP80 782 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 SLC17A6Q9P2U8 582 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 SCML2Q9UQR0 700 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 PRRC2BQ5JSZ5 2229 aaKnown RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 ZBTB24O43167 697 aaPredicted RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 UGT1A9O60656 530 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 JCHAINP01591 159 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 EN2P19622 333 aaPredicted RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 WDR5P61964 334 aaKnown RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 PKN2Q16513 984 aaKnown RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 AGBL2Q5U5Z8 902 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 CASC4Q6P4E1 433 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 ANKS3Q6ZW76 656 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 ZNF534Q76KX8 674 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 C16orf59Q7L2K0 433 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 OTOP3Q7RTS5 596 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 C4orf33Q8N1A6 199 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 FUBP3Q96I24 572 aaKnown RBP eCLIP8.01□□□□□ -1.13
NEK3-207ENST00000617054 C8orf48Q96LL4 319 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 EPAS1Q99814 870 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 TSPYL1Q9H0U9 437 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 UGT1A7Q9HAW7 530 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 UGT1A10Q9HAW8 530 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 UGT1A8Q9HAW9 530 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 GKN1Q9NS71 199 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 KLHL8Q9P2G9 620 aaPredicted RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 SLC12A6Q9UHW9 1150 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 RABGEF1Q9UJ41 708 aa8.01□□□□□ -1.13
NEK3-207ENST00000617054 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.01□□□□□ -1.13
NEK3-207ENST00000617054 SLC12A8A0AV02 714 aa8□□□□□ -1.13
NEK3-207ENST00000617054 OR6C75A6NL08 312 aa8□□□□□ -1.13
NEK3-207ENST00000617054 ANKRD65E5RJM6 399 aa8□□□□□ -1.13
NEK3-207ENST00000617054 HOXA2O43364 376 aa8□□□□□ -1.13
NEK3-207ENST00000617054 GCATO75600 419 aa8□□□□□ -1.13
NEK3-207ENST00000617054 GJB5O95377 273 aa8□□□□□ -1.13
NEK3-207ENST00000617054 SYN1P17600 705 aa8□□□□□ -1.13
NEK3-207ENST00000617054 LSP1P33241 339 aa8□□□□□ -1.13
NEK3-207ENST00000617054 SCAPQ12770 1279 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PAFAH1B3Q15102 231 aaKnown RBP8□□□□□ -1.13
NEK3-207ENST00000617054 ALFQ53S48 1182 aa8□□□□□ -1.13
NEK3-207ENST00000617054 SPDYCQ5MJ68 293 aa8□□□□□ -1.13
NEK3-207ENST00000617054 RAP1GAP2Q684P5 730 aa8□□□□□ -1.13
NEK3-207ENST00000617054 RFWD3Q6PCD5 774 aa8□□□□□ -1.13
NEK3-207ENST00000617054 FBXO46Q6PJ61 603 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 TAX1BP1Q86VP1 789 aa8□□□□□ -1.13
NEK3-207ENST00000617054 GDAP1Q8TB36 358 aa8□□□□□ -1.13
NEK3-207ENST00000617054 BCAS4Q8TDM0 211 aa8□□□□□ -1.13
NEK3-207ENST00000617054 RTP4Q96DX8 246 aa8□□□□□ -1.13
NEK3-207ENST00000617054 PGM2Q96G03 612 aa8□□□□□ -1.13
NEK3-207ENST00000617054 ZNF512Q96ME7 567 aaPredicted RBP8□□□□□ -1.13
NEK3-207ENST00000617054 XPO6Q96QU8 1125 aaKnown RBP8□□□□□ -1.13
NEK3-207ENST00000617054 CYP2S1Q96SQ9 504 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms