RNA–Protein interactions for RNA: ENST00000605086.5

FOCAD-216, Transcript of focadhesin, humanhuman

TSL 1 (best) BASIC

Gene FOCAD, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-216ENST00000605086 TRIM16LQ309B1 348 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SH3PXD2AQ5TCZ1 1133 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 RBM12BQ8IXT5 1001 aaKnown RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 MPP5Q8N3R9 675 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 RYBPQ8N488 228 aaPredicted RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 UBR7Q8N806 425 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 GABPB2Q8TAK5 448 aaPredicted RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 FNIP1Q8TF40 1166 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 HTR3CQ8WXA8 447 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SDCCAG3Q96C92 435 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 HPDLQ96IR7 371 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SDCBP2Q9H190 292 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 C2orf40Q9H1Z8 148 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 LRRC40Q9H9A6 602 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 PFDN4Q9NQP4 134 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 XPNPEP1Q9NQW7 623 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 AP4E1Q9UPM8 1137 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 AKT3Q9Y243 479 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 PTPRJQ12913 1337 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 GOLGA8TH3BQL2 631 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 ESRRBO95718 433 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 MPSTP25325 297 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 HMGB2P26583 209 aaKnown RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 GRIA1P42261 906 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 PTGER2P43116 358 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 PSMD7P51665 324 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SLC25A11Q02978 314 aaKnown RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 NME3Q13232 169 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 GRTP1Q5TC63 336 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 FAM91A1Q658Y4 838 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 XYLT1Q86Y38 959 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 NIPA2Q8N8Q9 360 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 FAM47BQ8NA70 645 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 NETO2Q8NC67 525 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 IFT43Q96FT9 208 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 NPAS2Q99743 824 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 CIB1Q99828 191 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SNRNP25Q9BV90 132 aaKnown RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SNX15Q9NRS6 342 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 IARS2Q9NSE4 1012 aaKnown RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 CCDC167Q9P0B6 97 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 ZNF541Q9H0D2 1346 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 A0A0J9YVX5 310 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 C1orf232A0A0U1RR37 186 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 XPOTO43592 962 aaKnown RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 TIMM44O43615 452 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 DNAJA2O60884 412 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 APOA4P06727 396 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 CXCL8P10145 99 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 PPARGP37231 505 aaPredicted RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 NEDD8Q15843 81 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SLC9B1Q4ZJI4 515 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 XRRA1Q6P2D8 792 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 FAM131BQ86XD5 332 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SCUBE3Q8IX30 993 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 CMASQ8NFW8 434 aaPredicted RBP7.33□□□□□ -1.24
FOCAD-216ENST00000605086 OSBPL11Q9BXB4 747 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 PORCNQ9H237 461 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 ADNPQ9H2P0 1102 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 PNPLA3Q9NST1 481 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 TSPAN16Q9UKR8 245 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 SNX9Q9Y5X1 595 aa7.33□□□□□ -1.24
FOCAD-216ENST00000605086 TRPC5OSA6NMA1 111 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 SLCO1B7G3V0H7 640 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 BUD23O43709 281 aaKnown RBP7.32□□□□□ -1.24
FOCAD-216ENST00000605086 CBFA2T3O75081 653 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 H2AFYO75367 372 aaKnown RBP7.32□□□□□ -1.24
FOCAD-216ENST00000605086 IL1BP01584 269 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 GTF2A2P52657 109 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 PSME3P61289 254 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 GBE1Q04446 702 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 MARVELD2Q8N4S9 558 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 PAF1Q8N7H5 531 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 PRICKLE1Q96MT3 831 aaPredicted RBP7.32□□□□□ -1.24
FOCAD-216ENST00000605086 PLEKHG4BQ96PX9 1271 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 TBCBQ99426 244 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 CPNE1Q99829 537 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 MED10Q9BTT4 135 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 CCDC90BQ9GZT6 254 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 CAB39LQ9H9S4 337 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 LRRC4Q9HBW1 653 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 TRPC7Q9HCX4 862 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 ZDHHC7Q9NXF8 308 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 SYNPO2Q9UMS6 1093 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 GMEB1Q9Y692 573 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 SF3B1O75533 1304 aaKnown RBP eCLIP7.32□□□□□ -1.24
FOCAD-216ENST00000605086 KCNK1O00180 336 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 TRIM38O00635 465 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 MAGEB3O15480 346 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 PHGDHO43175 533 aaKnown RBP7.32□□□□□ -1.24
FOCAD-216ENST00000605086 VAPBO95292 243 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 METTL18O95568 372 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 AMHP03971 560 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 SPATA31D3P0C874 917 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 PRKCHP24723 683 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 MTTPP55157 894 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 CDK18Q07002 472 aa7.32□□□□□ -1.24
FOCAD-216ENST00000605086 MSLNQ13421 630 aaPredicted RBP7.32□□□□□ -1.24
FOCAD-216ENST00000605086 HNRNPDQ14103 355 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms