RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 TEKT4Q8WW24 435 aa22.81■■□□□ 1.24
CHMP2A-204ENST00000597848 PNKPQ96T60 521 aa22.81■■□□□ 1.24
CHMP2A-204ENST00000597848 MFSD1Q9H3U5 465 aa22.81■■□□□ 1.24
CHMP2A-204ENST00000597848 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.81■■□□□ 1.24
CHMP2A-204ENST00000597848 MPP6Q9NZW5 540 aa22.81■■□□□ 1.24
CHMP2A-204ENST00000597848 CLEC4EQ9ULY5 219 aa22.81■■□□□ 1.24
CHMP2A-204ENST00000597848 DRGXA6NNA5 263 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 ZSCAN12O43309 604 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 CNTN5O94779 1100 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 DGKGP49619 791 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 IRAK1P51617 712 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 STARD6P59095 220 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 KDSRQ06136 332 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 CDH18Q13634 790 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 KRT81Q14533 505 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 C5orf22Q49AR2 442 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 GRAMD4Q6IC98 578 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 ZNF662Q6ZS27 426 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 CCAR2Q8N163 923 aaKnown RBP22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 TBC1D31Q96DN5 1066 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 KCTD15Q96SI1 283 aaPredicted RBP22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 SLC2A11Q9BYW1 496 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 ZYG11BQ9C0D3 744 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 ARHGEF4Q9NR80 690 aa22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 NDRG2Q9UN36 371 aaKnown RBP22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 MRPS17Q9Y2R5 130 aaKnown RBP22.8■■□□□ 1.24
CHMP2A-204ENST00000597848 MYOFQ9NZM1 2061 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 IGLV3-10A0A075B6K4 115 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 A0A1B0GVM2 712 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 GRID2IPA4D2P6 1211 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 TCAF2A6NFQ2 919 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 EEF2KO00418 725 aaKnown RBP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 TRIM24O15164 1050 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 CLDN11O75508 207 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 PALMO75781 387 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 LUC7L3O95232 432 aaKnown RBP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 EIF2DP41214 584 aaKnown RBP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 CDH4P55283 916 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 TPI1P60174 286 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 GRSF1Q12849 480 aaKnown RBP eCLIP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 ZNF177Q13360 481 aaPredicted RBP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 PREPLQ4J6C6 727 aaPredicted RBP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 ATP13A4Q4VNC1 1196 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 ALFQ53S48 1182 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 RHOT1Q8IXI2 618 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 SYCE1Q8N0S2 351 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 KCTD6Q8NC69 237 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 TBC1D17Q9HA65 648 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 FBRSL1Q9HCM7 1045 aaKnown RBP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 PPARGC1AQ9UBK2 798 aaKnown RBP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 NCOR1O75376 2440 aa22.79■■□□□ 1.24
CHMP2A-204ENST00000597848 DAPK3O43293 454 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 APODP05090 189 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 EPHB2P29323 1055 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 CDH6P55285 790 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 SEMA3BQ13214 749 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 UBXN2BQ14CS0 331 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 MANEALQ5VSG8 457 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 CHST9Q7L1S5 443 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 TFAP2DQ7Z6R9 452 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 ZNF557Q8N988 423 aaPredicted RBP22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 KLHL11Q9NVR0 708 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 TRMT1Q9NXH9 659 aaKnown RBP22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 FBXO10Q9UK96 956 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 PYCARDQ9ULZ3 195 aa22.78■■□□□ 1.24
CHMP2A-204ENST00000597848 TTC28Q96AY4 2481 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 KANSL1LA0AUZ9 987 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 TBC1D3BA6NDS4 549 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 TMEM221A6NGB7 291 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 SHISA7A6NL88 538 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 H3BRJ5 948 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 M0R296 226 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 KAT7O95251 611 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 CISD3P0C7P0 127 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 ARL4AP40617 200 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 GRIA2P42262 883 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 DPYSL2Q16555 572 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 ODF2Q5BJF6 829 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 LRRC38Q5VT99 294 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 ASTLQ6HA08 431 aaPredicted RBP22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 NUDT18Q6ZVK8 323 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 POLNQ7Z5Q5 900 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 SUGP1Q8IWZ8 645 aaKnown RBP22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 LRRC57Q8N9N7 239 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 FLCNQ8NFG4 579 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 FIBINQ8TAL6 211 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 WFDC5Q8TCV5 224 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 NELL2Q99435 816 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 EPHX3Q9H6B9 360 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 PCDH18Q9HCL0 1135 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 ABCB8Q9NUT2 735 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 CAPN6Q9Y6Q1 641 aa22.77■■□□□ 1.24
CHMP2A-204ENST00000597848 COL4A2P08572 1712 aa22.77■■□□□ 1.23
CHMP2A-204ENST00000597848 FAM170BA6NMN3 283 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 RHOQP17081 205 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 GOT1P17174 413 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 HTR7P34969 479 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms