RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 DPP3Q9NY33 737 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 NLGN3Q9NZ94 848 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 CPSF2Q9P2I0 782 aaKnown RBP2.54□□□□□ -2
SNORD53-201ENST00000579969 PISDQ9UG56 409 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 SUN2Q9UH99 717 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 PPM1HQ9ULR3 514 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 PLA2G4CQ9UP65 541 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 TP53TG5Q9Y2B4 290 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 MAP4K5Q9Y4K4 846 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 RBM8AQ9Y5S9 174 aaKnown RBP2.54□□□□□ -2
SNORD53-201ENST00000579969 SCN1AP35498 2009 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 OBSL1O75147 1896 aa2.54□□□□□ -2
SNORD53-201ENST00000579969 ACANP16112 2415 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 POLEQ07864 2286 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 SHANK1Q9Y566 2161 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TBC1D3DA0A087WVF3 549 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TBC1D3IA0A087WXS9 549 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TBC1D3EA0A087X179 549 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TBC1D3KA0A087X1G2 549 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 PRAMEF33A0A0G2JMD5 474 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 A0A1W2PP55 124 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 SLC12A8A0AV02 714 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 HEATR9A2RTY3 570 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TBC1D3FA6NER0 549 aaPredicted RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 SFI1A8K8P3 1242 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 ZNF891A8MT65 544 aaPredicted RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 C10orf142B7Z368 130 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TBC1D3LB9A6J9 549 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 F8VP50 259 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 AGRPO00253 132 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TULP2O00295 520 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 SLC27A2O14975 620 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 MUSKO15146 869 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 SLC16A4O15374 487 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 CAPN5O15484 640 aaPredicted RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 HCRTO43612 131 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 GREM1O60565 184 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 JAK2O60674 1132 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 PRAMEF10O60809 474 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 RNASEH1O60930 286 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 MED24O75448 989 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 RNASEH2AO75792 299 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 NEBLO76041 1014 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 CNTN5O94779 1100 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TBX18O95935 607 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 PDGFRBP09619 1106 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 PRR29P0C7W0 189 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TBC1D3HP0C7X1 549 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TNNT1P13805 278 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 DRD2P14416 443 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 NR1D1P20393 614 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 LMO2P25791 158 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 CHMLP26374 656 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 CD82P27701 267 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 PCSK1P29120 753 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 MAT2AP31153 395 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 DDIT3P35638 169 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 MAGEA8P43361 318 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 LEPRP48357 1165 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 ATP1A2P50993 1020 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 FXR2P51116 673 aaKnown RBP eCLIP2.53□□□□□ -2
SNORD53-201ENST00000579969 PDX1P52945 283 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 MAPK10P53779 464 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 RCAN1P53805 252 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 NOP14P78316 857 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 CBX1P83916 185 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 CYP27A1Q02318 531 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 MCL1Q07820 350 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 KCNMA1Q12791 1236 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 IFRD2Q12894 506 aaPredicted RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 STRN3Q13033 797 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 MRPL49Q13405 166 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 SPIDRQ14159 915 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TMEM132DQ14C87 1099 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 EIF4HQ15056 248 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 RABEP1Q15276 862 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 NTRK3Q16288 839 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 ZSCAN26Q16670 478 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 KYAT1Q16773 422 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 CCDC142Q17RM4 750 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 BMT2Q1RMZ1 405 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 SMTNL2Q2TAL5 461 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 POM121L1PQ3SYA9 428 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 SV2CQ496J9 727 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 FNDC3BQ53EP0 1204 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 ZC3H12AQ5D1E8 599 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 ZNF542PQ5EBM4 170 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 PERM1Q5SV97 790 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TMEM164Q5U3C3 297 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 SNX30Q5VWJ9 437 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 FYB2Q5VWT5 728 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 NUGGCQ68CJ6 796 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TMEM215Q68D42 235 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 ZNF776Q68DI1 518 aaPredicted RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 TBC1D3GQ6DHY5 549 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TBC1D3CQ6IPX1 549 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 GALNT17Q6IS24 598 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 TCTN3Q6NUS6 607 aa2.53□□□□□ -2
SNORD53-201ENST00000579969 ZCCHC8Q6NZY4 707 aaKnown RBP2.53□□□□□ -2
SNORD53-201ENST00000579969 GUSBP11Q6P575 273 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms