RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 OSTM1Q86WC4 334 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 CD302Q8IX05 232 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 TRIM22Q8IYM9 498 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 DAW1Q8N136 415 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 GANCQ8TET4 914 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 BRF1Q92994 677 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 C5orf34Q96MH7 638 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 SLITRK1Q96PX8 696 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 KCNK17Q96T54 332 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 BHMT2Q9H2M3 363 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 NCOA5Q9HCD5 579 aaKnown RBP7.26□□□□□ -1.25
CHD3-213ENST00000571249 EPB41L5Q9HCM4 733 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 ELOVL2Q9NXB9 296 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 DPP3Q9NY33 737 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 VTI1BQ9UEU0 232 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 RABGEF1Q9UJ41 708 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 METRNQ9UJH8 293 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 FBXO10Q9UK96 956 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 L1RE1Q9UN81 338 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 NCKAP1Q9Y2A7 1128 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 SLC27A6Q9Y2P4 619 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 MAP4K5Q9Y4K4 846 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 PCDHB11Q9Y5F2 797 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 SCN1AP35498 2009 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 POLEQ07864 2286 aa7.26□□□□□ -1.25
CHD3-213ENST00000571249 K7ESM1 405 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 GREM1O60565 184 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 HUS1O60921 280 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 HIP1RO75146 1068 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 DEXIO95424 95 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 PDGFAP04085 211 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 SNRPB2P08579 225 aaKnown RBP7.25□□□□□ -1.25
CHD3-213ENST00000571249 PRKAR1AP10644 381 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 LIFP15018 202 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 CPA1P15085 419 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 NOP14P78316 857 aaKnown RBP7.25□□□□□ -1.25
CHD3-213ENST00000571249 ZBTB16Q05516 673 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 CAMK2GQ13555 558 aaPredicted RBP7.25□□□□□ -1.25
CHD3-213ENST00000571249 KYAT1Q16773 422 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 DEFB109BQ30KR1 87 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 POM121L1PQ3SYA9 428 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 TTC31Q49AM3 519 aaPredicted RBP7.25□□□□□ -1.25
CHD3-213ENST00000571249 NUGGCQ68CJ6 796 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 FAM171BQ6P995 826 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 CLEC17AQ6ZS10 378 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 Q6ZUG5 572 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 HTR3DQ70Z44 454 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 PRIMA1Q86XR5 153 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 RBBP8NLQ8NC74 664 aaPredicted RBP7.25□□□□□ -1.25
CHD3-213ENST00000571249 USP7Q93009 1102 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 MYLPFQ96A32 169 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 CEP295NLQ96MC4 621 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 TM6SF1Q9BZW5 370 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 CIPCQ9C0C6 399 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 NACA2Q9H009 215 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 NEUROG2Q9H2A3 272 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 MTG2Q9H4K7 406 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.25□□□□□ -1.253e-8■■■■■ 104.9
CHD3-213ENST00000571249 CHORDC1Q9UHD1 332 aaPredicted RBP7.25□□□□□ -1.25
CHD3-213ENST00000571249 CLEC4EQ9ULY5 219 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 SLC5A6Q9Y289 635 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 DERAQ9Y315 318 aa7.25□□□□□ -1.25
CHD3-213ENST00000571249 PRRC2AP48634 2157 aaKnown RBP7.25□□□□□ -1.25
CHD3-213ENST00000571249 NOTCH1P46531 2555 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 LRRC72A6NJI9 287 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 C10orf142B7Z368 130 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 C9orf172C9J069 976 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 F8VP50 259 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 ACTN4O43707 911 aaKnown RBP7.24□□□□□ -1.25
CHD3-213ENST00000571249 FAM189A1O60320 539 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 TCEA3O75764 348 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 PIAS2O75928 621 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 CD99P14209 185 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 JUNDP17535 347 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 YWHAQP27348 245 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 RPA1P27694 616 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 PCSK1P29120 753 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 PSMC1P62191 440 aaKnown RBP7.24□□□□□ -1.25
CHD3-213ENST00000571249 FANCCQ00597 558 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 CYP27A1Q02318 531 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 ARID5AQ03989 594 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 CUL4AQ13619 759 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 E2F5Q15329 346 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 ZNF542PQ5EBM4 170 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 RNF20Q5VTR2 975 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 ASB18Q6ZVZ8 466 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 CXXC5Q7LFL8 322 aaKnown RBP7.24□□□□□ -1.25
CHD3-213ENST00000571249 MFSD2AQ8NA29 543 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 GTF3C6Q969F1 213 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 FBXO32Q969P5 355 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 BICD1Q96G01 975 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 SYNDIG1Q9H7V2 258 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 FBXL12Q9NXK8 326 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 NLGN3Q9NZ94 848 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 CPSF3Q9UKF6 684 aaKnown RBP7.24□□□□□ -1.25
CHD3-213ENST00000571249 PHTF1Q9UMS5 762 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 MYH10P35580 1976 aa7.24□□□□□ -1.25
CHD3-213ENST00000571249 FLNAP21333 2647 aaKnown RBP7.23□□□□□ -1.25
CHD3-213ENST00000571249 A0A1W2PP55 124 aa7.23□□□□□ -1.25
CHD3-213ENST00000571249 PRSS44E7EML9 344 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms