RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CLEC18CQ8NCF0 446 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 OR4C6Q8NH72 309 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 CYFIP2Q96F07 1278 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 VCPIP1Q96JH7 1222 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 TMX3Q96JJ7 454 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 SERAC1Q96JX3 654 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.45□□□□□ -0.9
PRKCH-208ENST00000553846 DUSP16Q9BY84 665 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 TRIM4Q9C037 500 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 TNMDQ9H2S6 317 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 APOBEC3GQ9HC16 384 aaKnown RBP9.45□□□□□ -0.9
PRKCH-208ENST00000553846 AASDHPPTQ9NRN7 309 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 STARD5Q9NSY2 213 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 PLA2G4CQ9UP65 541 aa9.45□□□□□ -0.9
PRKCH-208ENST00000553846 SLC12A8A0AV02 714 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 PMS2P1A4D2B8 440 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 FAM47DPA6NHR8 397 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 H3BQV1 296 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 EFSO43281 561 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 STX6O43752 255 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 SDC3O75056 442 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 CKMT1AP12532 417 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 STAT6P42226 847 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 METAP1P53582 386 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 AP3M2P53677 418 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 ZNF445P59923 1031 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 ASIC1P78348 528 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 LINC00303Q3SY05 128 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 FAM26FQ5R3K3 315 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 ADGRF1Q5T601 910 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 PPP1R26Q5T8A7 1209 aaPredicted RBP9.44□□□□□ -0.9
PRKCH-208ENST00000553846 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 LSMEM2Q8N112 164 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 KDM1BQ8NB78 822 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 TMEM145Q8NBT3 493 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 TAF4BQ92750 862 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 SKA1Q96BD8 255 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 MYEOVQ96EZ4 313 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 PRICKLE1Q96MT3 831 aaPredicted RBP9.44□□□□□ -0.9
PRKCH-208ENST00000553846 BACH2Q9BYV9 841 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 UCKL1Q9NWZ5 548 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 SUN2Q9UH99 717 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 TPX2Q9ULW0 747 aaKnown RBP9.44□□□□□ -0.9
PRKCH-208ENST00000553846 HBS1LQ9Y450 684 aaKnown RBP9.44□□□□□ -0.9
PRKCH-208ENST00000553846 RP1P56715 2156 aa9.44□□□□□ -0.9
PRKCH-208ENST00000553846 SPTBN1Q01082 2364 aaKnown RBP9.44□□□□□ -0.9
PRKCH-208ENST00000553846 LRRC72A6NJI9 287 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 USP12O75317 370 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 CSO75390 466 aaKnown RBP9.43□□□□□ -0.9
PRKCH-208ENST00000553846 RNASEH2AO75792 299 aaKnown RBP9.43□□□□□ -0.9
PRKCH-208ENST00000553846 RPN1P04843 607 aaKnown RBP9.43□□□□□ -0.9
PRKCH-208ENST00000553846 ATP5BP06576 529 aaKnown RBP9.43□□□□□ -0.9
PRKCH-208ENST00000553846 GP1BAP07359 652 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 GOT1P17174 413 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 DGKAP23743 735 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 SLC6A4P31645 630 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 YWHAGP61981 247 aaKnown RBP eCLIP9.43□□□□□ -0.9
PRKCH-208ENST00000553846 ARID5AQ03989 594 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 OVGP1Q12889 678 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 CLN3Q13286 438 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 BIRC3Q13489 604 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 SGSM1Q2NKQ1 1148 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 ARL13BQ3SXY8 428 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 PIK3R6Q5UE93 754 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 SV2AQ7L0J3 742 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 PRICKLE2Q7Z3G6 844 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 CLEC14AQ86T13 490 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 PIGZQ86VD9 579 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 MMAAQ8IVH4 418 aaKnown RBP9.43□□□□□ -0.9
PRKCH-208ENST00000553846 NELFCDQ8IXH7 590 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 SLC46A1Q96NT5 459 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 DEPDC7Q96QD5 511 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 NT5C1AQ9BXI3 368 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
PRKCH-208ENST00000553846 UBXN6Q9BZV1 441 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 GPR27Q9NS67 375 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
PRKCH-208ENST00000553846 CYTH4Q9UIA0 394 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 NCKAP1Q9Y2A7 1128 aa9.43□□□□□ -0.9
PRKCH-208ENST00000553846 TTC34A8MYJ7 566 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 TULP2O00295 520 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 SUV39H1O43463 412 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 PHACTR2O75167 634 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 NTRK1P04629 796 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 P4HA1P13674 534 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 SLC8A1P32418 973 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 TXLNAP40222 546 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 CSKP41240 450 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 CTSOP43234 321 aaPredicted RBP9.42□□□□□ -0.9
PRKCH-208ENST00000553846 PDX1P52945 283 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 ISXQ2M1V0 245 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 NADSYN1Q6IA69 706 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 MSANTD2Q6P1R3 559 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 TRIM69Q86WT6 500 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 SLC9A9Q8IVB4 645 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 ARHGAP18Q8N392 663 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 FIBINQ8TAL6 211 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 NDRG1Q92597 394 aaKnown RBP9.42□□□□□ -0.9
PRKCH-208ENST00000553846 PTPRN2Q92932 1015 aa9.42□□□□□ -0.9
PRKCH-208ENST00000553846 TMA16Q96EY4 203 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms