RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 TACR2P21452 398 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 CD70P32970 193 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 TEAD4Q15561 434 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 ST3GAL2Q16842 350 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 HNRNPA1L2Q32P51 320 aaKnown RBP11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 VWA3BQ502W6 1294 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZC3H12AQ5D1E8 599 aaKnown RBP11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 RABGAP1LQ5R372 815 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 SYPL2Q5VXT5 272 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 RNF219Q5W0B1 726 aaPredicted RBP11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 LRSAM1Q6UWE0 723 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 IRF2BP1Q8IU81 584 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 C1orf131Q8NDD1 294 aaKnown RBP11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 ADAM32Q8TC27 787 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 RNF34Q969K3 372 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 LMLNQ96KR4 655 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 SLC2A13Q96QE2 648 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 NUCKS1Q9H1E3 243 aaKnown RBP11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 MIR1-1HGQ9H1L0 117 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 RSPH9Q9H1X1 276 aaPredicted RBP11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 NDST4Q9H3R1 872 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 FAM204AQ9H8W3 233 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 DNAJC12Q9UKB3 198 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 PAXBP1Q9Y5B6 917 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 PCDHB9Q9Y5E1 797 aa11.26□□□□□ -0.61
VTI1BP3-201ENST00000550220 NUP205Q92621 2012 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 BECN2A8MW95 431 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 GIPC1O14908 333 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 SEMA4FO95754 770 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 MOCS2O96007 188 aaPredicted RBP11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZNF883P0CG24 379 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 MAOBP27338 520 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 CSKP41240 450 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 SGSHP51688 502 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 AFF3P51826 1226 aaKnown RBP11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 PLK1P53350 603 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 RPS14P62263 151 aaKnown RBP11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 RPS24P62847 133 aaKnown RBP11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 ECT2LQ008S8 904 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 EIF4EBP2Q13542 120 aaPredicted RBP11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 SUZ12Q15022 739 aaKnown RBP11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZNF423Q2M1K9 1284 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 GJB7Q6PEY0 223 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 CHSY1Q86X52 802 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 FAM71AQ8IYT1 594 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 LGI2Q8N0V4 545 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 WDTC1Q8N5D0 677 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 SKA1Q96BD8 255 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 CPXM1Q96SM3 734 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 TUBGCP2Q9BSJ2 902 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 PDCL3Q9H2J4 239 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 CD93Q9NPY3 652 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 DDIT4Q9NX09 232 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 CYTH4Q9UIA0 394 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 CACNA1BQ00975 2339 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 PLXND1Q9Y4D7 1925 aa11.25□□□□□ -0.61
VTI1BP3-201ENST00000550220 EDDM13A0A1B0GTR0 161 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 A0A1B0GVM2 712 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 TMEM8BA6NDV4 472 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 TCAF2A6NFQ2 919 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 FOXN3O00409 490 aaPredicted RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 DFNA5O60443 496 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 GJB3O75712 270 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 F9P00740 461 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 TPM2P07951 284 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 CD59P13987 128 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 EEF1GP26641 437 aaKnown RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 NOS2P35228 1153 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 SCNN1AP37088 669 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 VASPP50552 380 aaPredicted RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 SIM1P81133 766 aaPredicted RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 SLC6A3Q01959 620 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 FOXC1Q12948 553 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 GRIK2Q13002 908 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 PITRM1Q5JRX3 1037 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 RAP1GAP2Q684P5 730 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 OR6B2Q6IFH4 312 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 SLC26A9Q7LBE3 791 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 FAM124AQ86V42 546 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 DEFB106AQ8N104 65 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 CFAP52Q8N1V2 620 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZCCHC9Q8N567 271 aaKnown RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 TMEM35BQ8NCS4 154 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 MSANTD4Q8NCY6 345 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZNF397Q8NF99 534 aaPredicted RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 WFDC5Q8TCV5 224 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 GANCQ8TET4 914 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 PRICKLE1Q96MT3 831 aaPredicted RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 NUP62CLQ9H1M0 184 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 PABPC3Q9H361 631 aaKnown RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 ACP6Q9NPH0 428 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 EIF2B4Q9UI10 523 aaKnown RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 FZD4Q9ULV1 537 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 STAP1Q9ULZ2 295 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 ERVW-1Q9UQF0 538 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 PCDHGB2Q9Y5G2 931 aa11.24□□□□□ -0.61
VTI1BP3-201ENST00000550220 PI4KAP42356 2102 aa11.23□□□□□ -0.61
VTI1BP3-201ENST00000550220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms