RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 SERAC1Q96JX3 654 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 SLC29A1Q99808 456 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 NPLQ9BXD5 320 aaPredicted RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 STN1Q9H668 368 aaKnown RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 TRIM39Q9HCM9 518 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 SNTG2Q9NY99 539 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 ITGA11Q9UKX5 1188 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 PSME4Q14997 1843 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 DICER1Q9UPY3 1922 aaKnown RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 M0R2N6 131 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 AURKAO14965 403 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 ASNA1O43681 348 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 CLPXO76031 633 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 TDP2O95551 362 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 GH2P01242 217 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 NMT1P30419 496 aaKnown RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 SERPINB1P30740 379 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 GNL1P36915 607 aaPredicted RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 MLLT10P55197 1068 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 GPX6P59796 221 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 ATP6V0D1P61421 351 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 CDK18Q07002 472 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 STX3Q13277 289 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 MAPRE1Q15691 268 aaKnown RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 NEDD8Q15843 81 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 CALCRLQ16602 461 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 CYP4A22Q5TCH4 519 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 NEK5Q6P3R8 708 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 TTC30BQ8N4P2 665 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 BHLHE22Q8NFJ8 381 aaPredicted RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 PEX13Q92968 403 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 PGBD4Q96DM1 585 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 C7orf26Q96N11 449 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 SYT11Q9BT88 431 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 FOXP3Q9BZS1 431 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 RUBCNLQ9H714 662 aa9.96□□□□□ -0.81
CLDN2-202ENST00000540876 AVENQ9NQS1 362 aaPredicted RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 APOBEC2Q9Y235 224 aaKnown RBP9.96□□□□□ -0.81
CLDN2-202ENST00000540876 CLDN25C9JDP6 229 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 COPEO14579 308 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 CLIC2O15247 247 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 CDH1P12830 882 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 ETS1P14921 441 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 DCKP27707 260 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 GRIA3P42263 894 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 RAD23AP54725 363 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 STX1BP61266 288 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 ECT2LQ008S8 904 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 GPS1Q13098 491 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 ALCAMQ13740 583 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 TUBA3CQ13748 450 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 NFE2Q16621 373 aaPredicted RBP9.96□□□□□ -0.82
CLDN2-202ENST00000540876 MGAT5BQ3V5L5 792 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 ADGRD1Q6QNK2 874 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 ZCCHC23Q6ZST2 131 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 SLC51BQ86UW2 128 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 BRSK2Q8IWQ3 736 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 GLIS1Q8NBF1 620 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 TFB1MQ8WVM0 346 aaKnown RBP9.96□□□□□ -0.82
CLDN2-202ENST00000540876 FIG4Q92562 907 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 SLC35C1Q96A29 364 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 PSKH2Q96QS6 385 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 OSBPL11Q9BXB4 747 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 ARMC1Q9NVT9 282 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 UCKL1Q9NWZ5 548 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 HMGXB4Q9UGU5 601 aa9.96□□□□□ -0.82
CLDN2-202ENST00000540876 POLR2AP24928 1970 aaKnown RBP9.95□□□□□ -0.82
CLDN2-202ENST00000540876 FAM172BPA6NC97 362 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 H3BUI4 141 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 CYB561D2O14569 222 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 CFLARO15519 480 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 SCO2O43819 266 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 KRT6AP02538 564 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 KRT6BP04259 564 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 ZNF26P17031 533 aaPredicted RBP9.95□□□□□ -0.82
CLDN2-202ENST00000540876 WEE1P30291 646 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 RACK1P63244 317 aaKnown RBP9.95□□□□□ -0.82
CLDN2-202ENST00000540876 ZNF846Q147U1 533 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 STILQ15468 1287 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 ABCB5Q2M3G0 1257 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 LRIT3Q3SXY7 679 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.95□□□□□ -0.82
CLDN2-202ENST00000540876 CES4AQ5XG92 561 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 ZFP1Q6P2D0 407 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 OTOP3Q7RTS5 596 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 FAM83AQ86UY5 434 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 NUDCD3Q8IVD9 361 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.95□□□□□ -0.82
CLDN2-202ENST00000540876 CMTM5Q96DZ9 223 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 OMA1Q96E52 524 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 MAP6Q96JE9 813 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 CITED4Q96RK1 184 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 ZNF347Q96SE7 839 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 CIB1Q99828 191 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 PPCSQ9HAB8 311 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 KCNN3Q9UGI6 736 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 FOXN3O00409 490 aaPredicted RBP9.95□□□□□ -0.82
CLDN2-202ENST00000540876 AIM2O14862 343 aa9.95□□□□□ -0.82
CLDN2-202ENST00000540876 FKBP9O95302 570 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms