RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ENDOD1O94919 500 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 ASLP04424 464 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 DLDP09622 509 aaKnown RBP16.35■□□□□ 0.21
TSKU-204ENST00000533752 GZMAP12544 262 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 TFE3P19532 575 aaPredicted RBP16.35■□□□□ 0.21
TSKU-204ENST00000533752 CD70P32970 193 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 WASP42768 502 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 LMAN2Q12907 356 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 SLC12A1Q13621 1099 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 ZNF234Q14588 700 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 ARL13BQ3SXY8 428 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 TDRD12Q587J7 1177 aaKnown RBP16.35■□□□□ 0.21
TSKU-204ENST00000533752 E4F1Q66K89 784 aaPredicted RBP16.35■□□□□ 0.21
TSKU-204ENST00000533752 TMEM215Q68D42 235 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 MBLAC2Q68D91 279 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 TRNP1Q6NT89 227 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 FBXL22Q6P050 247 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 SERPINA13PQ6UXR4 307 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 STRADAQ7RTN6 431 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 ZNF571Q7Z3V5 609 aaPredicted RBP16.35■□□□□ 0.21
TSKU-204ENST00000533752 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.35■□□□□ 0.21
TSKU-204ENST00000533752 ADIPOR2Q86V24 386 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 MCOLN2Q8IZK6 566 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 CFAP52Q8N1V2 620 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 EMC1Q8N766 993 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 WFDC5Q8TCV5 224 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 HMGB4Q8WW32 186 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 MYEOVQ96EZ4 313 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 TRIM11Q96F44 468 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 HAPLN3Q96S86 360 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 PPP1R9BQ96SB3 815 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 ADAM33Q9BZ11 813 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 VANGL2Q9ULK5 521 aa16.35■□□□□ 0.21
TSKU-204ENST00000533752 A0A1W2PQF6 199 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 SYNCRIPO60506 623 aaKnown RBP16.34■□□□□ 0.21
TSKU-204ENST00000533752 CLDN11O75508 207 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 ADCY5O95622 1261 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 GYPCP04921 128 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 GPD1P21695 349 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 HOXC13P31276 330 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 IL12RB1P42701 662 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 ATP11AP98196 1134 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 SRSF5Q13243 272 aaKnown RBP16.34■□□□□ 0.21
TSKU-204ENST00000533752 ELF2Q15723 593 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 FUT11Q495W5 492 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 C5orf22Q49AR2 442 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 FNDC3BQ53EP0 1204 aaKnown RBP16.34■□□□□ 0.21
TSKU-204ENST00000533752 DCUN1D2Q6PH85 259 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 LRRC31Q6UY01 552 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 PHLDB2Q86SQ0 1253 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 CCAR2Q8N163 923 aaKnown RBP16.34■□□□□ 0.21
TSKU-204ENST00000533752 PGBD3Q8N328 593 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 RNF214Q8ND24 703 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 LOXL4Q96JB6 756 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 LMLNQ96KR4 655 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 C1orf74Q96LT6 269 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 SIK2Q9H0K1 926 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 FBRSQ9HAH7 460 aa16.34■□□□□ 0.21
TSKU-204ENST00000533752 USP34Q70CQ2 3546 aa16.33■□□□□ 0.21
TSKU-204ENST00000533752 SERPING1P05155 500 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 RETP07949 1114 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 TPM1P09493 284 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 MYBL1P10243 752 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 GABRG2P18507 467 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 RFC1P35251 1148 aaPredicted RBP16.33■□□□□ 0.2
TSKU-204ENST00000533752 CDH4P55283 916 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 ST8SIA6P61647 398 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 CDO1Q16878 200 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 CCDC14Q49A88 953 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 SPECC1LQ69YQ0 1117 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 FAM131BQ86XD5 332 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 GPR161Q8N6U8 529 aaKnown RBP16.33■□□□□ 0.2
TSKU-204ENST00000533752 KDM1BQ8NB78 822 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 JOSD2Q8TAC2 188 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 OLIG1Q8TAK6 271 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 TTC17Q96AE7 1141 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 ZC3H10Q96K80 434 aaKnown RBP16.33■□□□□ 0.2
TSKU-204ENST00000533752 MCEEQ96PE7 176 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 TPSD1Q9BZJ3 242 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 CD248Q9HCU0 757 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 PARVAQ9NVD7 372 aa16.33■□□□□ 0.2
TSKU-204ENST00000533752 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.32■□□□□ 0.2
TSKU-204ENST00000533752 TCRBV5S1A1TA0A578 114 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 TMCO5BA8MYB1 307 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 LRP3O75074 770 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 RTN2O75298 545 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 ZNF217O75362 1048 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 RHOBTB1O94844 696 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 RRM1P23921 792 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 CSKP41240 450 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 ZNF143P52747 638 aaPredicted RBP16.32■□□□□ 0.2
TSKU-204ENST00000533752 ATXN1P54253 815 aaKnown RBP16.32■□□□□ 0.2
TSKU-204ENST00000533752 SULT2A1Q06520 285 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 ZNF177Q13360 481 aaPredicted RBP16.32■□□□□ 0.2
TSKU-204ENST00000533752 LPAL2Q16609 132 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 C15orf59Q2T9L4 293 aaPredicted RBP16.32■□□□□ 0.2
TSKU-204ENST00000533752 PLEKHG6Q3KR16 790 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 PITRM1Q5JRX3 1037 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 RNF219Q5W0B1 726 aaPredicted RBP16.32■□□□□ 0.2
TSKU-204ENST00000533752 KIAA1211LQ6NV74 962 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms