RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CCDC152Q4G0S7 254 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 CFAP221Q4G0U5 840 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 DCAF12L1Q5VU92 463 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 PRAMEF9Q5VWM5 478 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 RSPH3Q86UC2 560 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 MPP5Q8N3R9 675 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 OR8K3Q8NH51 312 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 FOXRED1Q96CU9 486 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 MRPL38Q96DV4 380 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 ELP4Q96EB1 424 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 RBM17Q96I25 401 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 CFAP57Q96MR6 1250 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 SLC12A9Q9BXP2 914 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 SH2D4AQ9H788 454 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 SEC63Q9UGP8 760 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 MBD1Q9UIS9 605 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 BARX2Q9UMQ3 279 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 DYRK1BQ9Y463 629 aa5.44□□□□□ -1.54
ECHDC1-222ENST00000531967 WTIPA6NIX2 430 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 IGF2BP3O00425 579 aaKnown RBP eCLIP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 AKR7A3O95154 331 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 THBS1P07996 1170 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 ETS1P14921 441 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 ERCC2P18074 760 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 CDH2P19022 906 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 CD33P20138 364 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SP100P23497 879 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 MAGEA10P43363 369 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 ABCG1P45844 678 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 CAPZA1P52907 286 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 RAC3P60763 192 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SPAG1Q07617 926 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SPDYAQ5MJ70 313 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 FCRLBQ6BAA4 426 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SLC36A4Q6YBV0 504 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 THSD4Q6ZMP0 1018 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 ZNF365Q70YC5 407 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 TMPRSS7Q7RTY8 843 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 KANSL1Q7Z3B3 1105 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 CPNE8Q86YQ8 564 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 RASGRP3Q8IV61 690 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 FAM133AQ8N9E0 248 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 KDM1BQ8NB78 822 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 PSMA8Q8TAA3 256 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 ZNF671Q8TAW3 534 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 POMGNT1Q8WZA1 660 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 DDX17Q92841 729 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 TMX3Q96JJ7 454 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 PRICKLE1Q96MT3 831 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 FANCD2OSQ96PS1 177 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 CCDC77Q9BR77 488 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 WDR11Q9BZH6 1224 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 TRIM31Q9BZY9 425 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 STN1Q9H668 368 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 TTC12Q9H892 705 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 IARS2Q9NSE4 1012 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 KCND2Q9NZV8 630 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SPASTQ9UBP0 616 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 OSGIN1Q9UJX0 560 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 CNTN6Q9UQ52 1028 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 RAPGEF2Q9Y4G8 1499 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 PRDM2Q13029 1718 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 MAP3K19Q56UN5 1328 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SYNGAP1Q96PV0 1343 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SOBPA7XYQ1 873 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 BTBD18B2RXH4 712 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 STMND1H3BQB6 276 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SEC14L2O76054 403 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 KCNK5O95279 499 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 PDGFBP01127 241 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SLC6A9P48067 706 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 NR2C2P49116 596 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 STAT2P52630 851 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 METAP1P53582 386 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 AP3M2P53677 418 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 ASIC1P78348 528 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 NFIAQ12857 509 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 IL24Q13007 206 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 TTLL4Q14679 1199 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 CCDC142Q17RM4 750 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 HP1BP3Q5SSJ5 553 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 MRNIPQ6NTE8 343 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 GAREM2Q75VX8 874 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 KBTBD6Q86V97 674 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 TXNRD3Q86VQ6 643 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 IRF2BP1Q8IU81 584 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 TNPO1Q92973 898 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 SAT2Q96F10 170 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 HS6ST2Q96MM7 605 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 MIPEPQ99797 713 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 FERMT1Q9BQL6 677 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 MGME1Q9BQP7 344 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 EDEM2Q9BV94 578 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 XKR8Q9H6D3 395 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 CENPMQ9NSP4 180 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 BEX4Q9NWD9 120 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 TMOD3Q9NYL9 352 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 NAGPAQ9UK23 515 aa5.43□□□□□ -1.54
ECHDC1-222ENST00000531967 PADI1Q9ULC6 663 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms