RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 CLCA2Q9UQC9 943 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 HBS1LQ9Y450 684 aaKnown RBP9.37□□□□□ -0.91
VPS11-203ENST00000529545 MYLKQ15746 1914 aa9.37□□□□□ -0.91
VPS11-203ENST00000529545 KALRNO60229 2985 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 PLXNA2O75051 1894 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 ERVH48-1M5A8F1 160 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 CBX4O00257 560 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 BRINP1O60477 761 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 MAGEC1O60732 1142 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 CUTAO60888 179 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 PPP6R2O75170 966 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 RNASEH2AO75792 299 aaKnown RBP9.36□□□□□ -0.91
VPS11-203ENST00000529545 LATS1O95835 1130 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 ZBED1O96006 694 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 CKMT2P17540 419 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 EPHA8P29322 1005 aaPredicted RBP9.36□□□□□ -0.91
VPS11-203ENST00000529545 NASPP49321 788 aaPredicted RBP9.36□□□□□ -0.91
VPS11-203ENST00000529545 TKTL1P51854 596 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 GALCP54803 685 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 UCNP55089 124 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 E2F1Q01094 437 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 RHDQ02161 417 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 TLE3Q04726 772 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 LAPTM4AQ15012 233 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 ZNF394Q53GI3 561 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 NCEH1Q6PIU2 408 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 ADIPOR2Q86V24 386 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 PIGZQ86VD9 579 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 SPACA3Q8IXA5 215 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 CACTIN-AS1Q8N1I8 211 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 LINC00301Q8NCQ3 95 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 ZNF248Q8NDW4 579 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 OR2T34Q8NGX1 318 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 ZNF396Q96N95 335 aaPredicted RBP9.36□□□□□ -0.91
VPS11-203ENST00000529545 IPO9Q96P70 1041 aaKnown RBP9.36□□□□□ -0.91
VPS11-203ENST00000529545 ORAI3Q9BRQ5 295 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 RSPH9Q9H1X1 276 aaPredicted RBP9.36□□□□□ -0.91
VPS11-203ENST00000529545 ERVMER34-1Q9H9K5 563 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 DMAC2Q9NW81 257 aa9.36□□□□□ -0.91
VPS11-203ENST00000529545 SMG1Q96Q15 3661 aaKnown RBP9.35□□□□□ -0.91
VPS11-203ENST00000529545 A0A1W2PP55 124 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 TYW5A2RUC4 315 aaKnown RBP9.35□□□□□ -0.91
VPS11-203ENST00000529545 TLR4O00206 839 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 PDXKO00764 312 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 POLR2DO15514 142 aaKnown RBP9.35□□□□□ -0.91
VPS11-203ENST00000529545 ADH1BP00325 375 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 NR3C1P04150 777 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 ASLP04424 464 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 KRT13P13646 458 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 CASP1P29466 404 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 AFMP43652 599 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 SLC11A2P49281 568 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 CCR5P51681 352 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 VAMP7P51809 220 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 CUL4AQ13619 759 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 CST6Q15828 149 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 HNRNPA1L2Q32P51 320 aaKnown RBP9.35□□□□□ -0.91
VPS11-203ENST00000529545 TBC1D25Q3MII6 688 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 HS1BP3Q53T59 392 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 RAB41Q5JT25 222 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 MPP7Q5T2T1 576 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 SND1Q7KZF4 910 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPS11-203ENST00000529545 KIAA0907Q7Z7F0 614 aaPredicted RBP9.35□□□□□ -0.91
VPS11-203ENST00000529545 TMEM174Q8WUU8 243 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 TSC1Q92574 1164 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 WBP1Q96G27 269 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 SERAC1Q96JX3 654 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 NEUROG2Q9H2A3 272 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 LRRC4Q9HBW1 653 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 EXOC1Q9NV70 894 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 FAM13BQ9NYF5 915 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 ADAMTS1Q9UHI8 967 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 FZD4Q9ULV1 537 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 PTPRQQ9UMZ3 2332 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 CELSR3Q9NYQ7 3312 aa9.35□□□□□ -0.91
VPS11-203ENST00000529545 ZNF462Q96JM2 2506 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 TARSL2A2RTX5 802 aaKnown RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 MAPK13O15264 365 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 MID1O15344 667 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 IRAK2O43187 625 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 CALUO43852 315 aaPredicted RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 TBL1XO60907 577 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 SIN3BO75182 1162 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 MOCS3O95396 460 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 WNT1P04628 370 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 SLC8A1P32418 973 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 CD70P32970 193 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 RXRGP48443 463 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 GCLMP48507 274 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 PCBP4P57723 403 aaKnown RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 TMPRSS3P57727 454 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 NXPH1P58417 271 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 CUL4BQ13620 913 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 SHBQ15464 509 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 RNF219Q5W0B1 726 aaPredicted RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 PM20D1Q6GTS8 502 aa9.34□□□□□ -0.91
VPS11-203ENST00000529545 INTS8Q75QN2 995 aaKnown RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 PRPF39Q86UA1 669 aaKnown RBP9.34□□□□□ -0.91
VPS11-203ENST00000529545 MMAAQ8IVH4 418 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms