RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ZNF683Q8IZ20 524 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 CHPFQ8IZ52 775 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 CARNMT1Q8N4J0 409 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 WFDC5Q8TCV5 224 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 WFIKKN2Q8TEU8 576 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 IGSF8Q969P0 613 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 TTC17Q96AE7 1141 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 DNAJC7Q99615 494 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 GABRG3Q99928 467 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 TRIM5Q9C035 493 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 RAB6CQ9H0N0 254 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 CD248Q9HCU0 757 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 POLMQ9NP87 494 aaPredicted RBP11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 TMPRSS4Q9NRS4 437 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 KIAA1522Q9P206 1035 aaPredicted RBP11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 ARHGAP20Q9P2F6 1191 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 GGA2Q9UJY4 613 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 PLA2G4CQ9UP65 541 aa11.52□□□□□ -0.57
SCARNA20-201ENST00000516768 A0A087X0T9 212 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 A0A1W2PQF6 199 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 ANKRD62A6NC57 917 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 TMEM191CA6NGB0 347 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 H0Y626 953 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 LUC7L3O95232 432 aaKnown RBP11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 ATP5BP06576 529 aaKnown RBP11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 FAM228BP0C875 321 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 GPD1P21695 349 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 CD70P32970 193 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 WASP42768 502 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 PLK1P53350 603 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 HDAC4P56524 1084 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 LMAN2Q12907 356 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 TBX2Q13207 712 aaPredicted RBP11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 SLC12A1Q13621 1099 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 ZNF234Q14588 700 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 TDRD12Q587J7 1177 aaKnown RBP11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 TTC39BQ5VTQ0 682 aaPredicted RBP11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 MBLAC2Q68D91 279 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 DCUN1D2Q6PH85 259 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 VPS36Q86VN1 386 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 FAM131BQ86XD5 332 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 AHI1Q8N157 1196 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 CCAR2Q8N163 923 aaKnown RBP11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 SUMF1Q8NBK3 374 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 TSTD1Q8NFU3 115 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 NKD2Q969F2 451 aaPredicted RBP11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 RPRD1AQ96P16 312 aaPredicted RBP11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 HHIPQ96QV1 700 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 CNPY3Q9BT09 278 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 CIPCQ9C0C6 399 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 OSBPL2Q9H1P3 480 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 INTS6Q9UL03 887 aaKnown RBP11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 VANGL2Q9ULK5 521 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 STON1Q9Y6Q2 735 aa11.51□□□□□ -0.57
SCARNA20-201ENST00000516768 IGLV3-10A0A075B6K4 115 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 A0A1B0GVM2 712 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 TCAF2A6NFQ2 919 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 AXIN1O15169 862 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 CLDN11O75508 207 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 ALDH1A2O94788 518 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 LMNAP02545 664 aaKnown RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 TPM1P09493 284 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 DLDP09622 509 aaKnown RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 MYBL1P10243 752 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 POLR2EP19388 210 aaKnown RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 MRE11P49959 708 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 ADKP55263 362 aaKnown RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 CDH4P55283 916 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 OXCT1P55809 520 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 ZNF177Q13360 481 aaPredicted RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 CDH18Q13634 790 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 CDO1Q16878 200 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 ASTE1Q2TB18 679 aaPredicted RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 ARL13BQ3SXY8 428 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 ALKBH5Q6P6C2 394 aaKnown RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 LRRC31Q6UY01 552 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 FAM172AQ8WUF8 416 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 TRIM11Q96F44 468 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 MCEEQ96PE7 176 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 PPP1R9BQ96SB3 815 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 ANP32EQ9BTT0 268 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 EPC1Q9H2F5 836 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 TMEM245Q9H330 911 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 MRPL47Q9HD33 250 aaKnown RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 CACNA2D2Q9NY47 1150 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 CNOT8Q9UFF9 292 aaKnown RBP11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 OR12D3Q9UGF7 316 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 TBC1D30Q9Y2I9 924 aa11.5□□□□□ -0.57
SCARNA20-201ENST00000516768 SSU72P8A0A1W2PR75 194 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 E9PAM4 449 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 SRGAP2O75044 1071 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 CNTN5O94779 1100 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 MOCS3O95396 460 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 HOXB2P14652 356 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 GGCXP38435 758 aa11.49□□□□□ -0.57
SCARNA20-201ENST00000516768 EIF4A3P38919 411 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms