RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 PPIGQ13427 754 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 SIM2Q14190 667 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 UAP1Q16222 522 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 TCTN1Q2MV58 587 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 PPP6R3Q5H9R7 873 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 RNF43Q68DV7 783 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 FCRLBQ6BAA4 426 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 C8orf74Q6P047 294 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 SLC39A4Q6P5W5 647 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 CNKSR3Q6P9H4 555 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 PPP1R21Q6ZMI0 780 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 C4orf50Q6ZRC1 276 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 TICAM1Q8IUC6 712 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 ELMOD2Q8IZ81 293 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 EIF1ADQ8N9N8 165 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 DBF4BQ8NFT6 615 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 PIP4K2CQ8TBX8 421 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 SEPT8Q92599 483 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 BADQ92934 168 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 CEP19Q96LK0 163 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 ACCSQ96QU6 501 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 ACO2Q99798 780 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 ECSITQ9BQ95 431 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 TBC1D10AQ9BXI6 508 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 FTHL17Q9BXU8 183 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 KCTD10Q9H3F6 313 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 EHD2Q9NZN4 543 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 SLC8A2Q9UPR5 921 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 STXBP5LQ9Y2K9 1186 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 MAD1L1Q9Y6D9 718 aa9.87□□□□□ -0.83
PDLIM5-207ENST00000503974 A6NL46 340 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PPP1R3GB7ZBB8 358 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 TRAFD1O14545 582 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 TGFB1I1O43294 461 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 NDUFA2O43678 99 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 SCO2O43819 266 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 TFAP2AP05549 437 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 SNRPAP09012 282 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 SMIM18P0DKX4 95 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 SYN1P17600 705 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 ATF6P18850 670 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 HADHAP40939 763 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 GNG2P59768 71 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 SNRPFP62306 86 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 DSG1Q02413 1049 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PDE1CQ14123 709 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 SQLEQ14534 574 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 LEXMQ3ZCV2 418 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 FOXR2Q6PJQ5 311 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 C16orf59Q7L2K0 433 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 GPR141Q7Z602 305 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 RALGPS2Q86X27 583 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 GATAD2AQ86YP4 633 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 SMYD4Q8IYR2 804 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PSD4Q8NDX1 1056 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 OR2W6PQ8NHA6 318 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 LINC01599Q8WXQ3 324 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 REXO5Q96IC2 774 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 CCDC138Q96M89 665 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 MOGAT1Q96PD6 335 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 TARS2Q9BW92 718 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 THAP9Q9H5L6 903 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PDZD7Q9H5P4 517 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 KIAA1586Q9HCI6 787 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 THEGQ9P2T0 379 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 SNX12Q9UMY4 172 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 POLHQ9Y253 713 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 AP3M1Q9Y2T2 418 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 TYW5A2RUC4 315 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PCP4L1A6NKN8 68 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 XPO1O14980 1071 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 TOM1L1O75674 476 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PSMG1O95456 288 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 CD44P16070 742 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PRKAR1BP31321 381 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 GNL1P36915 607 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 MLLT3P42568 568 aaPredicted RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 MMP13P45452 471 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 STT3AP46977 705 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 ATP6V0D1P61421 351 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PDAP1Q13442 181 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 CUL1Q13616 776 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 TOMM20Q15388 145 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 KNOP1Q1ED39 458 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 UBXN11Q5T124 520 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 ARMC4Q5T2S8 1044 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 ATF7IP2Q5U623 682 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 KIAA1841Q6NSI8 718 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 NOTUMQ6P988 496 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 C12orf56Q8IXR9 622 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 CASKIN2Q8WXE0 1202 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 BORCS5Q969J3 196 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 PSD2Q9BQI7 771 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 EPB41L5Q9HCM4 733 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 S100A14Q9HCY8 104 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 RGS18Q9NS28 235 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 DPP7Q9UHL4 492 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 RABGEF1Q9UJ41 708 aa9.86□□□□□ -0.83
PDLIM5-207ENST00000503974 SOX13Q9UN79 622 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms