RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SUN3Q8TAQ9 357 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 SETD6Q8TBK2 473 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 PPP2R3CQ969Q6 453 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 RNFT2Q96EX2 444 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 DCAF5Q96JK2 942 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 WDFY2Q96P53 400 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 HIST1H2AAQ96QV6 131 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 AGAP2Q99490 1192 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 NAA11Q9BSU3 229 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-224ENST00000497488 OSBPL1AQ9BXW6 950 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 IMPG2Q9BZV3 1241 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 SERHL2Q9H4I8 314 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 GSTO2Q9H4Y5 243 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 SLC32A1Q9H598 525 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 TTC12Q9H892 705 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-224ENST00000497488 NRIP3Q9NQ35 241 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 AKAP7Q9P0M2 348 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-224ENST00000497488 STOML1Q9UBI4 398 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 BTBD3Q9Y2F9 522 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 RAXQ9Y2V3 346 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 PTRH2Q9Y3E5 179 aaKnown RBP6.42□□□□□ -1.38
BRCA1-224ENST00000497488 PCDHB7Q9Y5E2 793 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 FPGT-TNNI3KV9GXZ4 949 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 KIF21BO75037 1637 aa6.42□□□□□ -1.38
BRCA1-224ENST00000497488 PLB1Q6P1J6 1458 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 AGAP5A6NIR3 686 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 BTBD18B2RXH4 712 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 M0QYT0 321 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 SCAMP1O15126 338 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 PRPSAP2O60256 369 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 ADAM23O75077 832 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 RB1P06400 928 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 TPOP07202 933 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 C1SP09871 688 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 EEF2P13639 858 aaKnown RBP6.41□□□□□ -1.38
BRCA1-224ENST00000497488 FDPSP14324 419 aaKnown RBP6.41□□□□□ -1.38
BRCA1-224ENST00000497488 RBL1P28749 1068 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 HTR7P34969 479 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 RFC1P35251 1148 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-224ENST00000497488 SLC15A1P46059 708 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 AMPHP49418 695 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 HK2P52789 917 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 RCAN1P53805 252 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 SLC12A3P55017 1021 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 LILRA4P59901 499 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 RBM6P78332 1123 aaKnown RBP6.41□□□□□ -1.38
BRCA1-224ENST00000497488 GOLGA8DPQ0D2H9 430 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 SMAD4Q13485 552 aaKnown RBP6.41□□□□□ -1.38
BRCA1-224ENST00000497488 RNF43Q68DV7 783 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 MAMDC4Q6UXC1 1216 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 TXNRD3Q86VQ6 643 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 SPARTQ8N0X7 666 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 PDPRQ8NCN5 879 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 SLC35B2Q8TB61 432 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 SPATA18Q8TC71 538 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 MR1Q95460 341 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 ZNF622Q969S3 477 aaKnown RBP eCLIP6.41□□□□□ -1.385e-8■■■□□ 17.3
BRCA1-224ENST00000497488 ARRDC3Q96B67 414 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 PGAM5Q96HS1 289 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 CCDC114Q96M63 670 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 C16orf45Q96MC5 204 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-224ENST00000497488 ANP32EQ9BTT0 268 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 ZNF552Q9H707 407 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-224ENST00000497488 SCPEP1Q9HB40 452 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 DDX43Q9NXZ2 648 aaKnown RBP6.41□□□□□ -1.38
BRCA1-224ENST00000497488 ETAA1Q9NY74 926 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 DUSP12Q9UNI6 340 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 ADGRF5Q8IZF2 1346 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 COL15A1P39059 1388 aa6.41□□□□□ -1.38
BRCA1-224ENST00000497488 MAPKBP1O60336 1514 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 ABCC2Q92887 1545 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 CCDC187A0A096LP49 1063 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 TEX13CA0A0J9YWL9 993 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 CDHR4A6H8M9 788 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 CDRT15L2A8MXV6 281 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 KCNJ18B7U540 433 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 AGPSO00116 658 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 NRP1O14786 923 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 CTIFO43310 598 aaKnown RBP6.4□□□□□ -1.38
BRCA1-224ENST00000497488 TOX4O94842 621 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 OLFM2O95897 454 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 PNPP00491 289 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 ABCB1P08183 1280 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-224ENST00000497488 SNRPA1P09661 255 aaKnown RBP6.4□□□□□ -1.38
BRCA1-224ENST00000497488 GABRB1P18505 474 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 HK1P19367 917 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 THBS4P35443 961 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 TXKP42681 527 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 KCNQ1P51787 676 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 PGDP52209 483 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 PRKAG1P54619 331 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 CSE1LP55060 971 aaKnown RBP6.4□□□□□ -1.38
BRCA1-224ENST00000497488 PRKCQQ04759 706 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 CBX3Q13185 183 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 SNTB1Q13884 538 aaKnown RBP6.4□□□□□ -1.38
BRCA1-224ENST00000497488 BAATQ14032 418 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-224ENST00000497488 KCNJ12Q14500 433 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 ANKDD1AQ495B1 522 aa6.4□□□□□ -1.38
BRCA1-224ENST00000497488 CRY2Q49AN0 593 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms