RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SAR1AQ9NR31 198 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 BMP6P22004 513 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 FEN1P39748 380 aaKnown RBP17.97■□□□□ 0.47
NPHP4-209ENST00000489180 AUHQ13825 339 aaKnown RBP17.97■□□□□ 0.47
NPHP4-209ENST00000489180 SDE2Q6IQ49 451 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 PLEKHH3Q7Z736 793 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 KATNAL2Q8IYT4 538 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 LRRN4Q8WUT4 740 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 MTFMTQ96DP5 389 aaKnown RBP17.97■□□□□ 0.47
NPHP4-209ENST00000489180 TMEM169Q96HH4 297 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 TBCBQ99426 244 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 NDEL1Q9GZM8 345 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 KRCC1Q9NPI7 259 aaPredicted RBP17.97■□□□□ 0.47
NPHP4-209ENST00000489180 ETNK2Q9NVF9 386 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 CRYL1Q9Y2S2 319 aa17.97■□□□□ 0.47
NPHP4-209ENST00000489180 PIGNO95427 931 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 DARSP14868 501 aaKnown RBP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 KDELR1P24390 212 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 CHKAP35790 457 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 KCNJ2P63252 427 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 C15orf59Q2T9L4 293 aaPredicted RBP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 POLNQ7Z5Q5 900 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 RNF180Q86T96 592 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 OOSP2Q86WS3 158 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 EFCAB3Q8N7B9 438 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 DNAJB3Q8WWF6 145 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 A1CFQ9NQ94 594 aaKnown RBP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 MIEF1Q9NQG6 463 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 DDX4Q9NQI0 724 aaKnown RBP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 AVENQ9NQS1 362 aaPredicted RBP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 TRPM5Q9NZQ8 1165 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 FMO4P31512 558 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 DSG3P32926 999 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 NPY2RP49146 381 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 SLC6A3Q01959 620 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 TBCDQ9BTW9 1192 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 MEGF6O75095 1541 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 SMIM22K7EJ46 135 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 APOC4-APOC2K7ER74 178 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 SYNCRIPO60506 623 aaKnown RBP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 APOC2P02655 101 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 ATP13A4Q4VNC1 1196 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 FAM45BPQ6NSW5 357 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 PRMT9Q6P2P2 845 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 FAM126BQ8IXS8 530 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 ANKRD27Q96NW4 1050 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 PGLYRP2Q96PD5 576 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 ANKRD6Q9Y2G4 727 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 H0YC42 278 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 YBX3P16989 372 aaKnown RBP eCLIP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 OR1E1P30953 314 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 MARCKSL1P49006 195 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 EIF2B2P49770 351 aaKnown RBP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 GRIK4Q16099 956 aa17.96■□□□□ 0.47
NPHP4-209ENST00000489180 ZCCHC7Q8N3Z6 543 aaKnown RBP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 SENP6Q9GZR1 1112 aaPredicted RBP17.96■□□□□ 0.47
NPHP4-209ENST00000489180 H3BRB1 525 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 SNX3O60493 162 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 IFNA14P01570 189 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 ARMC4Q5T2S8 1044 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 FAM9CQ8IZT9 166 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 NACC2Q96BF6 587 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 TUT1Q9H6E5 874 aaKnown RBP17.95■□□□□ 0.46
NPHP4-209ENST00000489180 DSEQ9UL01 958 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 BTN3A1O00481 513 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 SERPINF2P08697 491 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 IL1R1P14778 569 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 NR2C2P49116 596 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 ANXA11P50995 505 aaKnown RBP17.95■□□□□ 0.46
NPHP4-209ENST00000489180 CASP7P55210 303 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 IRGCQ6NXR0 463 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 TMC5Q6UXY8 1006 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 MRPS31Q92665 395 aaKnown RBP17.95■□□□□ 0.46
NPHP4-209ENST00000489180 MTMR9Q96QG7 549 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 HDHD2Q9H0R4 259 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 TBX4P57082 545 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 METTL6Q8TCB7 284 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 ZFRQ96KR1 1074 aaKnown RBP17.95■□□□□ 0.46
NPHP4-209ENST00000489180 CAMKK2Q96RR4 588 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 PIPSLA2A3N6 862 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 A8MX80 341 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 RAMP2O60895 175 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 EPS8L1Q8TE68 723 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 OSGEPL1Q9H4B0 414 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 NRDE2Q9H7Z3 1164 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 KCNK4Q9NYG8 393 aa17.95■□□□□ 0.46
NPHP4-209ENST00000489180 ALDH1A2O94788 518 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 EGFRP00533 1210 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 TAF5Q15542 800 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 INAQ16352 499 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 RSPH1Q8WYR4 309 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 DGCR6LQ9BY27 220 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 NOL6Q9H6R4 1146 aaKnown RBP17.94■□□□□ 0.46
NPHP4-209ENST00000489180 SEMA4BQ9NPR2 832 aaPredicted RBP17.94■□□□□ 0.46
NPHP4-209ENST00000489180 COPG2Q9UBF2 871 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 NUDT5Q9UKK9 219 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 JCADQ9P266 1359 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 A0A0B4J269 797 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 TMEM114B3SHH9 223 aa17.94■□□□□ 0.46
NPHP4-209ENST00000489180 USP17L7P0C7H9 530 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms