RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 GK5Q6ZS86 529 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 TRMT11Q7Z4G4 463 aaKnown RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 FILIP1Q7Z7B0 1213 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 LRRTM3Q86VH5 581 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 MIB1Q86YT6 1006 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 NAT16Q8N8M0 369 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 ABHD4Q8TB40 342 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 SPPL2BQ8TCT7 592 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 IPO4Q8TEX9 1081 aaKnown RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 TOE1Q96GM8 510 aaKnown RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 EAF1Q96JC9 268 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 DRC1Q96MC2 740 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 ACOX2Q99424 681 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 ACO2Q99798 780 aaKnown RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 RNF26Q9BY78 433 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 TMEM206Q9H813 350 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 TTC12Q9H892 705 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 PTPRHQ9HD43 1115 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 SH3GLB2Q9NR46 395 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 FAM53CQ9NYF3 392 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 GCNT4Q9P109 453 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 EIF2B4Q9UI10 523 aaKnown RBP5.71□□□□□ -1.5
PTPN4-210ENST00000485247 RAD54BQ9Y620 910 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 NOTCH2Q04721 2471 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 CABIN1Q9Y6J0 2220 aa5.71□□□□□ -1.5
PTPN4-210ENST00000485247 DENND4CQ5VZ89 1909 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 ANO9A1A5B4 782 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 LEFTY2O00292 366 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 PPEF2O14830 753 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 BAG4O95429 457 aaKnown RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 AFPP02771 609 aaKnown RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 MCF2P10911 925 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 ODC1P11926 461 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 XRCC6P12956 609 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 LRPAP1P30533 357 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 EIF2DP41214 584 aaKnown RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 CCT8P50990 548 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 RCAN1P53805 252 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 FANCCQ00597 558 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 TEKQ02763 1124 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 SERINC3Q13530 473 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 PPP2R5AQ15172 486 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 NECTIN1Q15223 517 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 NTRK3Q16288 839 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 DDR2Q16832 855 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 C10orf76Q5T2E6 689 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 SDE2Q6IQ49 451 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 RHBDF2Q6PJF5 856 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 MPZL3Q6UWV2 235 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 LAYNQ6UX15 382 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 NEK8Q86SG6 692 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 CHPFQ8IZ52 775 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 EXD3Q8N9H8 876 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 C2orf15Q8WU43 125 aaKnown RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 KCNE4Q8WWG9 221 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 SNX19Q92543 992 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 ZBTB45Q96K62 511 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 FAM84AQ96KN4 292 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 CNDP2Q96KP4 475 aaKnown RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 MRGPRX1Q96LB2 322 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 IFT74Q96LB3 600 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 SENP8Q96LD8 212 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 TARS2Q9BW92 718 aaKnown RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 NT5C1AQ9BXI3 368 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 HDAC8Q9BY41 377 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 BACH2Q9BYV9 841 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 LSG1Q9H089 658 aaKnown RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 UXTQ9UBK9 157 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 PCDHA12Q9UN75 941 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 ARHGAP26Q9UNA1 814 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 NFE2L3Q9Y4A8 694 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 PCDHGA1Q9Y5H4 931 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 SLCO1B1Q9Y6L6 691 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 CREBBPQ92793 2442 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 OBSL1O75147 1896 aa5.7□□□□□ -1.5
PTPN4-210ENST00000485247 UBR5O95071 2799 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 MYO18AQ92614 2054 aaKnown RBP5.7□□□□□ -1.5
PTPN4-210ENST00000485247 DOPEY1Q5JWR5 2465 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 E2F8A0AVK6 867 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CCDC169A6NNP5 214 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 H0Y8X5 98 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 TRIM24O15164 1050 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 SUV39H1O43463 412 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 PCDHGA12O60330 932 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 NOL4O94818 638 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 LDOC1O95751 146 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 IGHDP01880 384 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 KRT1P04264 644 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 C1SP09871 688 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CXCL8P10145 99 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CDK4P11802 303 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CPA1P15085 419 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 RAC2P15153 192 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 TCF3P15923 654 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 GCFC2P16383 781 aaKnown RBP5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CYP11B2P19099 503 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 GLDCP23378 1020 aa5.69□□□□□ -1.5
PTPN4-210ENST00000485247 CYP2F1P24903 491 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms