RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TJP2Q9UDY2 1190 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PCSK1NQ9UHG2 260 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 FAM153AQ9UHL3 310 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 DNMT3LQ9UJW3 386 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CORO1CQ9ULV4 474 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PLAAQ9Y263 795 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 R3HDM2Q9Y2K5 976 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ATP8A1Q9Y2Q0 1164 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PCDHB12Q9Y5F1 795 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CENPFP49454 3210 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 DENND4CQ5VZ89 1909 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 MTCL1Q9Y4B5 1905 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 FAM237BA0A1B0GVD1 139 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 A0A1B0GVM2 712 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 A0A1W2PQ67 120 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ESYT3A0FGR9 886 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ILVBLA1L0T0 632 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TCAF2A6NFQ2 919 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ARHGAP42A6NI28 874 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TBKBP1A7MCY6 615 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PI4K2BG5E9Z4 385 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 H3BQF6 201 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 H7C0C1 242 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KLF11O14901 512 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KCNN4O15554 427 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PQBP1O60828 265 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SIN3BO75182 1162 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PAGE1O75459 146 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KRT37O76014 449 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KRT38O76015 456 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 USP1O94782 785 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 LRIG2O94898 1065 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 LUC7L3O95232 432 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 GJB5O95377 273 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 FAM107AO95990 144 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 IFNB1P01574 187 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 FGBP02675 491 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ITGB1P05556 798 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 URODP06132 367 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ADH1AP07327 375 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 GSTA1P08263 222 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CD48P09326 243 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 HNRNPA1P09651 372 aaKnown RBP eCLIP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 USP17L7P0C7H9 530 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CTSAP10619 480 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 COL6A2P12110 1019 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CPB1P15086 417 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TCF4P15884 667 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 RAG1P15918 1043 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PCSK2P16519 638 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 GOT1P17174 413 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KRT15P19012 456 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PAMP19021 973 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ACAT1P24752 427 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PSMA3P25788 255 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 RBL1P28749 1068 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 EPHB2P29323 1055 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 GBP2P32456 591 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CHKAP35790 457 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 MAPK8P45983 427 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ALDH1A3P47895 512 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 ATP5OP48047 213 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CSNK1DP48730 415 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SLC11A1P49279 550 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SLC11A2P49281 568 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 HARS2P49590 506 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 DNA2P51530 1060 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 IRAK1P51617 712 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 HK2P52789 917 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PRKAA2P54646 552 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 EPHA5P54756 1037 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 GEMP55040 296 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CSE1LP55060 971 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CDH4P55283 916 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TBX4P57082 545 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 C1QTNF8P60827 252 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 RPL26P61254 145 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 IRX1P78414 480 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SLC7A9P82251 487 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PDE1BQ01064 536 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SLC18A2Q05940 514 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 IL10RBQ08334 325 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 WASHC5Q12768 1159 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CDH17Q12864 832 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 IFRD2Q12894 506 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 MPP3Q13368 585 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SNX1Q13596 522 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 AUHQ13825 339 aaKnown RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 GRM3Q14832 879 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 MTFR1Q15390 333 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 TAF5Q15542 800 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PSMD5Q16401 504 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 KYNUQ16719 465 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 UGP2Q16851 508 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 CDO1Q16878 200 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SMTNL2Q2TAL5 461 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 SLC39A12Q504Y0 691 aa2.9□□□□□ -1.95
LINC00393-201ENST00000443621 INO80DQ53TQ3 878 aaPredicted RBP2.9□□□□□ -1.95
LINC00393-201ENST00000443621 PPP6R3Q5H9R7 873 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms