RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 DIDO1Q9BTC0 2240 aaKnown RBP11.63□□□□□ -0.55
RTN4-211ENST00000438462 PRAMEF26H0Y7S4 382 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 TIMM44O43615 452 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 MED24O75448 989 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 CBX6O95503 412 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 YWHAQP27348 245 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 RPIAP49247 311 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 ART1P52961 327 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 CACNA2D1P54289 1103 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 HNRNPKP61978 463 aaKnown RBP eCLIP11.63□□□□□ -0.556e-10■□□□□ 9.3
RTN4-211ENST00000438462 GOLGA8FQ08AF8 430 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 GOLGA8DPQ0D2H9 430 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 SKOR2Q2VWA4 1001 aaPredicted RBP11.63□□□□□ -0.55
RTN4-211ENST00000438462 C16orf46Q6P387 395 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 Q6ZNB5 142 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 SND1Q7KZF4 910 aaKnown RBP eCLIP11.63□□□□□ -0.553e-12■■■■□ 21.6
RTN4-211ENST00000438462 CATSPER3Q86XQ3 398 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 MMAAQ8IVH4 418 aaKnown RBP11.63□□□□□ -0.55
RTN4-211ENST00000438462 SLC22A18ASQ8N1D0 253 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 TMEM86AQ8N2M4 240 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 SDR16C5Q8N3Y7 309 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 LRRN4CLQ8ND94 238 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 OR13H1Q8NG92 308 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 PMEPA1Q969W9 287 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 TMEM159Q96B96 161 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 C8orf48Q96LL4 319 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 CMKLR1Q99788 373 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 SYT15Q9BQS2 421 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 BOCQ9BWV1 1114 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
RTN4-211ENST00000438462 INTS2Q9H0H0 1204 aaKnown RBP11.63□□□□□ -0.55
RTN4-211ENST00000438462 GPN2Q9H9Y4 310 aaPredicted RBP11.63□□□□□ -0.55
RTN4-211ENST00000438462 TMEM30AQ9NV96 361 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 DPP3Q9NY33 737 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 KCTD3Q9Y597 815 aa11.63□□□□□ -0.55
RTN4-211ENST00000438462 COL6A5A8TX70 2615 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 CCDC196A0A1B0GTZ2 297 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 A0A1W2PQM1 296 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 SLC16A4O15374 487 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 GRID2O43424 1007 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 TLR5O60602 858 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 ZG16O60844 167 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 HUS1O60921 280 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 RNASEH1O60930 286 aaKnown RBP11.62□□□□□ -0.55
RTN4-211ENST00000438462 RFPL1O75677 317 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 RPLP0P05388 317 aaKnown RBP11.62□□□□□ -0.55
RTN4-211ENST00000438462 NUDT1P36639 197 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 RCAN1P53805 252 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 CCL7P80098 99 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 SNX30Q5VWJ9 437 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 ZPBP2Q6X784 338 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 CD302Q8IX05 232 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 AHI1Q8N157 1196 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 TMEM145Q8NBT3 493 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 CPEB1Q9BZB8 566 aaKnown RBP11.62□□□□□ -0.55
RTN4-211ENST00000438462 B3GNT4Q9C0J1 378 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 TUFT1Q9NNX1 390 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 TLK1Q9UKI8 766 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 DERAQ9Y315 318 aa11.62□□□□□ -0.55
RTN4-211ENST00000438462 AQP9O43315 295 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 RAD1O60671 282 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 SIN3BO75182 1162 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 TBX18O95935 607 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 COX6B1P14854 86 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 GOT1P17174 413 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 BPIP17213 487 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 CAPN3P20807 821 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 SLC8A1P32418 973 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 PSMD8P48556 350 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 PER3P56645 1201 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 SETMARQ53H47 684 aaPredicted RBP11.61□□□□□ -0.55
RTN4-211ENST00000438462 ZC3H3Q8IXZ2 948 aaKnown RBP11.61□□□□□ -0.55
RTN4-211ENST00000438462 STARD8Q92502 1023 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 GLMNQ92990 594 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 CCDC74AQ96AQ1 378 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 HDAC11Q96DB2 347 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 IFT43Q96FT9 208 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 PCED1BQ96HM7 432 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 IL12RB2Q99665 862 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 OSBPL3Q9H4L5 887 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 ORC3Q9UBD5 711 aaPredicted RBP11.61□□□□□ -0.55
RTN4-211ENST00000438462 RBM19Q9Y4C8 960 aaKnown RBP11.61□□□□□ -0.55
RTN4-211ENST00000438462 CSNK1G3Q9Y6M4 447 aa11.61□□□□□ -0.55
RTN4-211ENST00000438462 PKDREJQ9NTG1 2253 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 FAM221AA4D161 298 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 ANKUB1A6NFN9 424 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 H3BM21 787 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 GABRDO14764 452 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 KRT86O43790 486 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 LHX1P48742 406 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 KYAT1Q16773 422 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 CHST9Q7L1S5 443 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 ZNF295-AS1Q8N0V1 137 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 DAW1Q8N136 415 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 NUP93Q8N1F7 819 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 Q8NA96 180 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 C19orf60Q96EN9 201 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 BICD1Q96G01 975 aa11.6□□□□□ -0.55
RTN4-211ENST00000438462 NOX5Q96PH1 765 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms