RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 WDR4P57081 412 aaKnown RBP26.41■■□□□ 1.82
CPNE1-216ENST00000437340 ZNF33AQ06730 810 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 IFRD2Q12894 506 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-216ENST00000437340 SPARCL1Q14515 664 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 PPP2R5DQ14738 602 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 UNC5AQ6ZN44 842 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 LRRC6Q86X45 466 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 CCNJLQ8IV13 435 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 NUP93Q8N1F7 819 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 NPWQ8N729 165 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 ANKS4BQ8N8V4 417 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 GDAP1Q8TB36 358 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 ATP11BQ9Y2G3 1177 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 PCDHB5Q9Y5E4 795 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 PCDHA11Q9Y5I1 949 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 ZWINTO95229 277 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 CA4P22748 312 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 PTPN3P26045 913 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 ITIH4Q14624 930 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 MON1AQ86VX9 555 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 TP53INP2Q8IXH6 220 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 VAT1Q99536 393 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 PPP1R12CQ9BZL4 782 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 TRHDEQ9UKU6 1024 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 ALDH2P05091 517 aa26.4■■□□□ 1.82
CPNE1-216ENST00000437340 PSMB4P28070 264 aa26.4■■□□□ 1.82
CPNE1-216ENST00000437340 HOXC13P31276 330 aa26.4■■□□□ 1.82
CPNE1-216ENST00000437340 GARSP41250 739 aaKnown RBP26.4■■□□□ 1.82
CPNE1-216ENST00000437340 CTXN3Q4LDR2 81 aa26.4■■□□□ 1.82
CPNE1-216ENST00000437340 ZNF280DQ6N043 979 aa26.4■■□□□ 1.82
CPNE1-216ENST00000437340 PID1Q7Z2X4 250 aa26.4■■□□□ 1.82
CPNE1-216ENST00000437340 ARHGAP18Q8N392 663 aa26.4■■□□□ 1.82
CPNE1-216ENST00000437340 PDCD7Q8N8D1 485 aaKnown RBP26.4■■□□□ 1.82
CPNE1-216ENST00000437340 NETO2Q8NC67 525 aa26.4■■□□□ 1.82
CPNE1-216ENST00000437340 SCLYQ96I15 445 aa26.4■■□□□ 1.82
CPNE1-216ENST00000437340 TGS1Q96RS0 853 aaKnown RBP26.4■■□□□ 1.82
CPNE1-216ENST00000437340 GOLGA6L7A0A1B0GV03 622 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 SDR42E2A6NKP2 422 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 MYO1CO00159 1063 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 FAM155BO75949 473 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 GRIA1P42261 906 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 IFT88Q13099 833 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 STEAP4Q687X5 459 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 RGS9BPQ6ZS82 235 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 PRPF39Q86UA1 669 aaKnown RBP26.39■■□□□ 1.82
CPNE1-216ENST00000437340 CASP10Q92851 521 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 SERPINB11Q96P15 392 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 NAT9Q9BTE0 207 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 KLHL8Q9P2G9 620 aaPredicted RBP26.39■■□□□ 1.82
CPNE1-216ENST00000437340 LRFN2Q9ULH4 789 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 SNX10Q9Y5X0 201 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 MAD1L1Q9Y6D9 718 aa26.39■■□□□ 1.82
CPNE1-216ENST00000437340 ZNF638Q14966 1978 aaKnown RBP26.39■■□□□ 1.81
CPNE1-216ENST00000437340 PIAS1O75925 651 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 MT-ND3P03897 115 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 FGFR3P22607 806 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 RPA3P35244 121 aaPredicted RBP26.38■■□□□ 1.81
CPNE1-216ENST00000437340 CCL23P55773 120 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 COG7P83436 770 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 LRRC26Q2I0M4 334 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 LGSNQ5TDP6 509 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 TTC39BQ5VTQ0 682 aaPredicted RBP26.38■■□□□ 1.81
CPNE1-216ENST00000437340 FAM171A1Q5VUB5 890 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 STAMBPL1Q96FJ0 436 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 TMEM106CQ9BVX2 250 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 MRPL9Q9BYD2 267 aaKnown RBP26.38■■□□□ 1.81
CPNE1-216ENST00000437340 IL37Q9NZH6 218 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 A0A1W2PQH9 124 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 FAM159BA6NKW6 160 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 KCNK1O00180 336 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 TM9SF1O15321 606 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 FGF10O15520 208 aaPredicted RBP26.38■■□□□ 1.81
CPNE1-216ENST00000437340 ELAVL2Q12926 359 aaKnown RBP26.38■■□□□ 1.81
CPNE1-216ENST00000437340 NUGGCQ68CJ6 796 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 MSANTD2Q6P1R3 559 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 MPP5Q8N3R9 675 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 OTUD6BQ8N6M0 293 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 BANPQ8N9N5 519 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 TMEM175Q9BSA9 504 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 NMUR1Q9HB89 426 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 TBX21Q9UL17 535 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 NEU3Q9UQ49 428 aa26.38■■□□□ 1.81
CPNE1-216ENST00000437340 ERI2A8K979 691 aaKnown RBP26.37■■□□□ 1.81
CPNE1-216ENST00000437340 SNX3O60493 162 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 NRG1Q02297 640 aaPredicted RBP26.37■■□□□ 1.81
CPNE1-216ENST00000437340 SMARCB1Q12824 385 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 TCTN1Q2MV58 587 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 MANEALQ5VSG8 457 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 ITPRIPL1Q6GPH6 555 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 CTAGE3PQ8IX95 158 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 CNPY4Q8N129 248 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 CRIPAKQ8N1N5 446 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 LZTR1Q8N653 840 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 PPM1NQ8N819 430 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 ELAC2Q9BQ52 826 aaKnown RBP26.37■■□□□ 1.81
CPNE1-216ENST00000437340 CEP41Q9BYV8 373 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 MCOLN1Q9GZU1 580 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 FGFR1OP2Q9NVK5 253 aa26.37■■□□□ 1.81
CPNE1-216ENST00000437340 MKI67P46013 3256 aaKnown RBP26.36■■□□□ 1.81
CPNE1-216ENST00000437340 PAGE1O75459 146 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms